Pairwise Alignments

Query, 364 a.a., tRNA 2-selenouridine synthase from Pseudomonas simiae WCS417

Subject, 365 a.a., tRNA 2-selenouridine synthase (RefSeq) from Shewanella sp. ANA-3

 Score =  353 bits (906), Expect = e-102
 Identities = 181/353 (51%), Positives = 235/353 (66%), Gaps = 2/353 (0%)

Query: 8   YRDIFLNDRPMMDTRAPVEFVKGAFPGAVNLPLMTDDERQRVGTCYKQQGQQAAIVLGHE 67
           Y DIF+  +P++D RAP+EF +GAFP +VNLPLM D ER++VGTCYK QGQQAAI LGH 
Sbjct: 11  YHDIFIAGQPLIDLRAPIEFDRGAFPSSVNLPLMVDKEREKVGTCYKAQGQQAAIALGHS 70

Query: 68  LVSGAIKAQRIEQWAQFAQANPEGYLYCFRGGLRSQIVQQWLKTEAGIEYPRVGGGYKAM 127
           LV G +K QRI+ W  F  ANPE YLYCFRGGLRSQ+ QQWL+ EAG+  P V GGYK M
Sbjct: 71  LVHGVVKQQRIDAWLNFLSANPEAYLYCFRGGLRSQLTQQWLQ-EAGVTAPYVQGGYKGM 129

Query: 128 RSFLLETVEQAATQCDFVLLGGMTGTGKTEVLGQLRNALDLEGHANHRGSSFGKRATGQP 187
           R +L+  +E A +Q   + L GMTG+GKT+ L   + A+DLEG ANHRGSSFGK    QP
Sbjct: 130 RQYLIGVIETAPSQQPLLSLSGMTGSGKTDFLRLRKEAIDLEGIANHRGSSFGKNIDPQP 189

Query: 188 SNIDFENRLAVDLLKKRAGGIEGFVVEDESRMIGSCALPLPLHKGMQTYPMVWLEDSVEG 247
           + I+FEN+LA+ LL+ + G     ++EDES +IG  ALP   +  MQT  +V LE+  + 
Sbjct: 190 TQINFENQLAIALLRHQLGNHACLLLEDESFLIGRSALPQSFYSAMQTADIVVLEEDDDI 249

Query: 248 RVERILRDYVVDLCAEFVDVFG-EQGHALFAERLTQSLANIHKRLGGERFQRLQAVMQDA 306
           R+ R+L +YV  +   F +  G E G   F+  L QSL +I KRLGG+++Q LQ +MQ A
Sbjct: 250 RLTRLLDEYVHKMHLGFSERLGLEAGFEAFSHYLLQSLGSIRKRLGGKQYQELQDMMQQA 309

Query: 307 LAEQARSGAVDLHRVWIEGLLREYYDPMYAFQRESKGARIEFAGEQGAVVEYL 359
           L++Q        H  WI  LL +YYDPMY +Q + K   I F G   A+ E+L
Sbjct: 310 LSQQLNQNQTSQHMAWISLLLHKYYDPMYEYQLQKKAGNILFRGSHQAMHEWL 362