Pairwise Alignments

Query, 250 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 318 a.a., DUF475 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

 Score = 47.8 bits (112), Expect = 3e-10
 Identities = 60/257 (23%), Positives = 103/257 (40%), Gaps = 41/257 (15%)

Query: 13  AWVALATLIVMEIVLGIDNLIFISILTNK--LPEQHRAKARRIGISMALVLRLGLLSTIA 70
           A ++  T  ++E  L +DNL   +I+ ++  +PE  R +A   G+  ALVLR        
Sbjct: 70  ATLSFITGYLLEKSLSVDNLFVFAIIFHQYSVPEHLRPRALLWGVIGALVLR-------- 121

Query: 71  FIVQLTAPVFEVFGQAFSWKDMILIAGGLFLVWK----ATTEIHHSMDPEPEEKETSAGN 126
                 A +  V  Q  S    IL    LFL+W     A  +   S++P PE       N
Sbjct: 122 ------AIMIAVGAQLLSQYHWILYVFALFLIWTGIQLARDKGEESINPLPERWIRRCFN 175

Query: 127 VV-----------------AIGFAAAIGQILLLDLVFSIDSIITAVGMTEHLPIMIIAVV 169
           V                         IG I  +D++F++DSI     MT+  P +++A  
Sbjct: 176 VTKEYQGNALICKQQGQWWVTPMFIVIGVIAFMDVMFALDSIPAIFAMTQE-PFLVLAAN 234

Query: 170 TSVIVMLVAAEPLAKFINDNPTVVMLALGFLIM---IGMTLIAEGFGAHVPKGYVYAAMA 226
              ++ L +   + + + D    +  AL F++M   + M L+   +    P       + 
Sbjct: 235 VFALLGLRSLYFVLQGMMDKFFYLKPALAFIMMFIGVKMMLVDSAWAIPTPISLCVLLVT 294

Query: 227 FSAAIECLNIARRNRHK 243
            S A+    +  R++ K
Sbjct: 295 MSTAVIASVLRERSQSK 311