Pairwise Alignments

Query, 360 a.a., RND transporter from Pseudomonas simiae WCS417

Subject, 366 a.a., RND family efflux transporter, MFP subunit from Pseudomonas stutzeri RCH2

 Score =  172 bits (436), Expect = 1e-47
 Identities = 107/352 (30%), Positives = 179/352 (50%), Gaps = 3/352 (0%)

Query: 9   IFGLGLLTLLSGCGEEKAEPKQHSRVFVQTVQSADFAAAVTLTGDIQARVQTDLSFRVGG 68
           +FG  L  +  G GE    P+Q  R  +         A  +  G++ AR + +L+FR+GG
Sbjct: 11  MFGCALALVACGNGEP---PQQLPRPVMVVQPQPASEARESYPGEVHARYEPELAFRIGG 67

Query: 69  KIIQRMVDVGDRVTAKQVLAKLDPKDLQTNVDSAQAQVVAEQARVKQTAAAFVRQEKLLP 128
           K+++R+V+ GDRV   Q LA+LDP+D++  +D  +AQV A +A ++   A   R + LL 
Sbjct: 68  KVVERLVEAGDRVRKDQPLARLDPQDVRLQLDGMRAQVAAAEANLRVAKAEHDRYKALLG 127

Query: 129 KGYTSRSEYDSAQAALRSSQSALAAAQAQLANAREQLGYTSLIADAPGVITARQAEVGQV 188
           +   S+S++D+A  A R++ + L  A+A+   A  Q+ Y  L A + G+I  R+ EVGQV
Sbjct: 128 RQLVSQSQFDNADNAYRAAAARLQQARAEFDVASNQVDYAVLRATSDGLIAQRRIEVGQV 187

Query: 189 VQATVPIFSLARDGERDAVFNVYESLLVEPPPDAPITVSLLDNPSIKAVGKVREVTPAVA 248
           V A    F LA DGER+   ++ E  L        + V L   P    +GK+RE++PA  
Sbjct: 188 VAAGQTAFVLAADGEREVAIDLPEQSLERYRVGQDVEVELWSQPGRHYLGKIRELSPAAD 247

Query: 249 ANTGTVQVKIALQALPKGMELGSVVSATANGPAKASIELPWAALTKDLSEPAVWLIDGDG 308
           A + T   ++A        ELG     +     + ++ +P +AL+ +     VW +  D 
Sbjct: 248 AQSRTYSARVAFSEQEVPAELGQSALVSIRRAGEVALAVPLSALSAEQGRAHVWRLKADS 307

Query: 309 KAQLHKVTVARYLTGKVIIGDGLKGGEKVVVAGGQLLHPGMRVEIAQQGAQP 360
             +  +V    +    V + +GL+  + +V+AG Q+L     V    +  +P
Sbjct: 308 TVERVEVRTGPFGEQLVPVLEGLEADDWIVLAGVQMLSDHQSVRPVDRHNRP 359