Pairwise Alignments

Query, 300 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 298 a.a., HTH-type transcriptional activator IlvY from Vibrio cholerae E7946 ATCC 55056

 Score = 62.8 bits (151), Expect = 9e-15
 Identities = 62/255 (24%), Positives = 106/255 (41%), Gaps = 19/255 (7%)

Query: 2   LNYRQLHYFWVVAKTGSIVRACEQLNLTPQTISGQISLLEQTFGIALFQRVGRQLELTEA 61
           +N + L  F  +    +  +    ++L+P  +S QI  LEQ  G  LF R  R +ELT A
Sbjct: 1   MNIKTLQLFMHLCDCKNFSKTASAMHLSPSALSRQIQKLEQDLGHTLFLRDNRSVELTPA 60

Query: 62  GRQALPYAEQMFQTGNELEAMLRAQPNEQQILFRVGVADVVPKSIVYRLIAPTMELSEAI 121
             Q LP A ++     +    L    + Q++   + +   V  S  +       EL  + 
Sbjct: 61  AHQLLPVAARIIHDWRQFTTEL--NDDSQELRGEIKLFCSVTASYSH-----LPELLSSF 113

Query: 122 RITCREDKLERLLADLAIQRLDLVISD------SPMPTHLDIKGYSQKLGECGISFFATQ 175
           R+     + + L  D A Q +D ++ D      S MP  L  +     + E  +S  A  
Sbjct: 114 RLKHPYIEFKLLTGDPA-QAIDKILHDEADIAISAMPEQLPSRIEFATISEIPLSVIAPL 172

Query: 176 ALA---DTYGGDFPQCLHGAPLLIPGAETVVRSRLQRWFAEQQIQPKIIGEFDDSALMQA 232
            ++   D    + P   +  P ++P + T  R R   WF + +I+P I  +      + +
Sbjct: 173 GISSFMDELQKEQPD-WNEIPFIVPESGT-ARDRANTWFKQMKIKPNIYAQIAGHEAIVS 230

Query: 233 FGQSGSGIFIAPSVI 247
               G G+ IAP V+
Sbjct: 231 LVALGCGVGIAPDVV 245