Pairwise Alignments

Query, 272 a.a., shikimate dehydrogenase from Pseudomonas simiae WCS417

Subject, 288 a.a., shikimate 5-dehydrogenase from Synechococcus elongatus PCC 7942

 Score = 88.2 bits (217), Expect = 2e-22
 Identities = 68/242 (28%), Positives = 115/242 (47%), Gaps = 15/242 (6%)

Query: 28  NHLYEQLGLNFYYKAF--SSQDLPGAIGGIRALGVRGCGVSMPFKEAAIALVDELDDSVQ 85
           N    +LGL++ Y  F     DL  A+ G+ A+GV+G  V++P K+A + L+ ++ +  Q
Sbjct: 28  NAAIAELGLDYCYVPFPVKGADLATALAGLAAIGVQGFNVTIPHKQAVMPLLSQVSELAQ 87

Query: 86  AIDSLNTIVNTDGHLKAYNTDYIA-IEQLLKKHAVPKDSTFALRGSGGMAKAVASALRDG 144
           ++ S+NT+  T+      NTD +  +  L    +        L G GG A+AV +     
Sbjct: 88  SVGSVNTVWQTEQGWVGTNTDVLGFLAPLQTLRSDWSGCRVVLLGCGGAARAVVAGCLQL 147

Query: 145 GYANGVIVARNEAAGRALAQNLG--------YAWRAELADM--RPQMLINVTPIGMTGGA 194
           G +    V R+   G A  Q+ G        + W +++ D+     +++N TP+GM    
Sbjct: 148 GCSAIATVVRDAQKGDAFQQSWGDRADSLTIHDW-SDIPDVLSTADLVVNTTPLGMDPHI 206

Query: 195 EADALAFDADAVDVAETV-FDVVAIPSETPLIVRGRAQGKRVITGLEVIAIQALEQFVLY 253
           E   L   A      ET+ +D++  PS T  + +  AQG   I GLE++  Q      ++
Sbjct: 207 ERSPLDNSAAQQLRPETIAYDLIYTPSPTRFLQQAIAQGCHAIDGLEMLVQQGAAGLKIW 266

Query: 254 TG 255
           TG
Sbjct: 267 TG 268