Pairwise Alignments

Query, 272 a.a., shikimate dehydrogenase from Pseudomonas simiae WCS417

Subject, 278 a.a., shikimate dehydrogenase (RefSeq) from Shewanella amazonensis SB2B

 Score = 68.2 bits (165), Expect = 2e-16
 Identities = 72/266 (27%), Positives = 115/266 (43%), Gaps = 24/266 (9%)

Query: 11  LCMSLSARPGNFGL--------RFHNHLYEQLGLNFYYKAFSS--QDLPGAIGGIRALGV 60
           +C+S++ R   FG         + H    ++ G    Y+A  +       A+    A G 
Sbjct: 2   ICLSMTDRFAVFGNPISHSKSPQIHAMFAKETGQTLTYEAILAPLDGFAEAVTAFMAAGG 61

Query: 61  RGCGVSMPFKEAAIALVDELDDSVQAIDSLNTIVN-TDGHLKAYNTDYIAIEQLLKKHAV 119
            G  V++PFKE A  L DEL D  +   ++NT++   DG L+  NTD + +   L +H V
Sbjct: 62  CGANVTVPFKEQAFTLCDELSDDARIAGAVNTLIKLPDGRLRGDNTDGMGLVADLIRHGV 121

Query: 120 P-KDSTFALRGSGGMAKAVASALRDGGYANGVIVARNEAAGRALAQ-----NLGYAWRAE 173
              +    L G+GG A+     L   G A   I  R  +   ALA      N+     + 
Sbjct: 122 ELNNKRVLLVGAGGAARGALLPLVRAG-AKLTISNRTLSKAEALAALCPKVNVEVISGSH 180

Query: 174 LADMRPQMLINVTPIGMTGGAEADALAFDADAVDVAETVFDVVAIPSETPLIVRGRAQGK 233
           +      ++IN T   ++G    D     A+A+D     +D++     T      R+ G 
Sbjct: 181 IRSPF-DVIINSTSASLSG----DLPVIAANAIDNQTVCYDMMYGAKPTVFNEWARSLGA 235

Query: 234 RV-ITGLEVIAIQALEQFVLYTGVRP 258
           ++ I GL ++  QA E F L+  VRP
Sbjct: 236 KICIDGLGMLVGQAAESFYLWRRVRP 261