Pairwise Alignments

Query, 272 a.a., shikimate dehydrogenase from Pseudomonas simiae WCS417

Subject, 278 a.a., shikimate dehydrogenase from Methanococcus maripaludis S2

 Score = 90.9 bits (224), Expect = 3e-23
 Identities = 64/250 (25%), Positives = 117/250 (46%), Gaps = 15/250 (6%)

Query: 21  NFGLRFHNHLYEQLGLNFYYKAF--SSQDLPGAIGGIRALGVRGCGVSMPFKEAAIALVD 78
           +F    HN   + L +N+ Y AF  S ++L   + G +A   RG  +++P K   +  +D
Sbjct: 19  SFSPIMHNAAIKDLKINYRYFAFDVSEENLKDVVAGAKAFNFRGFNITIPHKMNIMKYLD 78

Query: 79  ELDDSVQAIDSLNTIVNTDGHLKAYNTDYIAIEQLL-KKHAVPKDSTFALRGSGGMAKAV 137
           E+D   +AI ++NT+   +G    YNTD I +++ L +K  +  +    + GSGG ++AV
Sbjct: 79  EIDCDAEAIGAVNTVKIENGKAIGYNTDGIGVKKALEEKTGILINKNILIIGSGGASRAV 138

Query: 138 ASALRDGGYANGVIVARNEAAGRALAQNLGYAWRAE---------LADMRPQMLINVTPI 188
           +  L      N  IV RN      L++ +    + E         +      ++IN TP+
Sbjct: 139 SFELAKDN--NLTIVNRNIEKAENLSKEISRKLKKENPLNYGGLDINIENFDIIINTTPV 196

Query: 189 GMTGGAEADALAFDADAVDVAETVFDVVAIPSETPLIVRGRAQGKRVITGLEVIAIQALE 248
           GM    E + +    + +     V D++  P E   +   +  G + I G+ ++  Q   
Sbjct: 197 GMYPHTEVEPV-IPLNNIKKDAVVMDLIYNPLEPVFLKEAKKYGAKTINGIGMLVYQGAV 255

Query: 249 QFVLYTGVRP 258
            F ++TG++P
Sbjct: 256 SFEIWTGIKP 265