Pairwise Alignments

Query, 355 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 436 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  100 bits (248), Expect = 9e-26
 Identities = 80/333 (24%), Positives = 146/333 (43%), Gaps = 11/333 (3%)

Query: 14  LLGLVTIAFIWILLPFYGAVFWAVILGIIFAPMQRRLQQRFGWNRNLTSLATLSACLIIA 73
           LL L+ +  ++    F   V  AV++G    P+  RL Q  G N N T  AT++   ++A
Sbjct: 83  LLVLILLCGVYFFHGFLVPVLAAVVIGFASWPIYWRLLQ--GLNGNRTLAATIAIISVVA 140

Query: 74  ILPVIITSALL-----VQEGATLYKNIESGKLDVAGYIEQFKNVLPPYFQHLLDRFGMGN 128
            + V I+ A +     V++         +       ++     V     +  +   G   
Sbjct: 141 FIVVPISLAAIYAVEEVRDWLVWAVATNANGAPAPAWLATIPAVGAWLGEQWVKYVGHPG 200

Query: 129 LEGLREKIVKSAMQGSQFFATQAFSFGQGTFDFLVSFFIMLYLLYFLLRDGPELVRKVRT 188
             G   ++V  +  G+ +        G   F   ++   ML  L+F+ RDG    +++  
Sbjct: 201 ALGELVQLVSGSNIGNIYRGVLVV--GASAFQSFLTLLFMLITLFFVYRDGQSFSKQLDH 258

Query: 189 AVPLAEPQK-RRLQLKFNRVVRATVKGNVLVAVTQGALGGLIFWFLDIPSALLWAVLMAF 247
                 P +  RL       + +TV G  ++A+ +G + G+ +W   +PS +   +L   
Sbjct: 259 LGERIFPMRWERLSRVVPLTISSTVTGMGIIAIGEGIVLGVAYWLAGVPSPVTLGILTGI 318

Query: 248 LSLLPAVGAGIVWGPVAAYFLLSGAIWQGVVLALFGVFVIGLVDNVLRPILVGKDTKMPD 307
           ++L+P  GA + +  V+ Y + SG+   G+ L  +G   + +VD  LRP LVG   K+P 
Sbjct: 319 MALIPG-GAPLCFTLVSVYLVASGSPVHGIALFTWGTTELFIVDKTLRPRLVGGPIKLPF 377

Query: 308 YLILISTLGGLSVFGLNGFVIGPLVAALFMSSW 340
                  +GG+   G  G  +GP++ AL ++ W
Sbjct: 378 LPTFFGLIGGVKTMGFLGLFVGPVLMALLVAIW 410