Pairwise Alignments

Query, 355 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 371 a.a., permease from Sinorhizobium meliloti 1021

 Score = 85.1 bits (209), Expect = 3e-21
 Identities = 87/340 (25%), Positives = 156/340 (45%), Gaps = 27/340 (7%)

Query: 8   FKTLLLLLGLVTIAFIW--ILLPFYGAVFWAVILGIIFAPMQRRLQQRFGWNRNLTSLAT 65
           F  LL+L+G +    ++  ILLPF   +  A  L     P+  RL+ R G +R + ++A 
Sbjct: 15  FFWLLVLVGFIAFLLVFSSILLPFLAGMALAYFLD----PVADRLE-RLGLSRLMATIAI 69

Query: 66  LSACLIIAILPVIITSALLVQEGATLYKNIESGKLDVAGYIEQFKNVLPPYFQHLLDRFG 125
           L A +++  L ++I   L+V + A   + +        GYI + +  L      LL  + 
Sbjct: 70  LVAFVVVLALSLMIIVPLVVTQAAEFIQKMP-------GYITRLQEFLTDSQSTLLPDWL 122

Query: 126 MGNLEGLREKIVKSAMQGSQFFAT---QAFSFGQGTFDFLVSFFIMLYLLYFLLRDGPEL 182
            G +  +++   K   QG+ F  T   Q ++ G    + L  F I   + ++LL D   +
Sbjct: 123 AGQMTTIKQNSAKLLEQGASFLGTLFQQIWNSGLALLNILSLFVITPVVAFYLLLDWDRM 182

Query: 183 VRKVRTAVPLAEPQK-RRLQLKFNRVVRATVKGNVLVAVTQGALGGLIFWFLDIPSALLW 241
           V +V + +P    +  R++    N  +   V+G   + +  G   G+    + +   LL 
Sbjct: 183 VDRVDSWIPRDYVEVVRQIARDMNTTIAGFVRGQGSLCLILGLYYGIGLTMVGLNFGLLI 242

Query: 242 AVLMAFLSLLPAVGA--GIVWG-PVAAYFLLSGAIWQGVVLALF--GVFVIGLVDNVLRP 296
            +    +S +P VG+  G+V    VA        +W  +VLA+F  G F+ G   N+L+P
Sbjct: 243 GLFAGMISFIPYVGSLVGLVLALGVALVQFWPDYVWILLVLAVFFSGQFLEG---NILQP 299

Query: 297 ILVGKDTKMPDYLILISTLGGLSVFGLNGFVIG-PLVAAL 335
            LVGK   +    ++ + L   ++FG  G ++  P  AA+
Sbjct: 300 KLVGKSVGLHPVWLMFALLAFGALFGFVGLLVAVPAAAAI 339