Pairwise Alignments

Query, 355 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 384 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score = 76.6 bits (187), Expect = 1e-18
 Identities = 79/340 (23%), Positives = 146/340 (42%), Gaps = 23/340 (6%)

Query: 10  TLLLLLGLVTIAFIW---ILLPFYGAVFWAVILGIIFAPMQRRLQQRFGWNRNLTSLATL 66
           T +  +GLV +   W   ++ PF   + WA IL +   P    L    G    + +L   
Sbjct: 27  TEIARIGLVGLFAYWSFTLIAPFAIILIWAAILAVALYPAYAALSAILGQRPRVAALVIT 86

Query: 67  SACLIIAILPVIITSALLVQEGATLYKNIESGKLDVAGYIEQFKNVLPPYFQHLLDRFGM 126
              L++ + P+   +    +    +   +    L ++   +  ++  P   + +   + M
Sbjct: 87  MLGLLVIVAPLAAIAFSFAEGLQVVLARLNDRSLLISAPPDSIRS-FPLIGERIYSVWSM 145

Query: 127 G--NLEGLREKIVKSAMQGSQFFATQAFSFGQGTFDFLVSFFIMLYLLYFLLRDGPELVR 184
              NLE + ++I  + +Q       +  S G      L+SF + + +  FL   G  L  
Sbjct: 146 ASDNLEAVLQQIKPALLQAGSKALGKIASIGAD----LLSFVVSVLVAGFLFGSGARLAN 201

Query: 185 KVRTAVPLAEPQKRRLQLKFNRVVRATVK----GNVLVAVTQGALGGLIFWFLDIPSALL 240
              +A   A        + F ++  AT++    G + VA+ Q  L  LI     +P+   
Sbjct: 202 ---SAQGFASRMGGDRGVGFLQLAAATIRNVARGVIGVALLQAFLCILILSLFKVPAPGA 258

Query: 241 WAVLMAFLSLLPAVGAGIVWGPVAAYFLLSGAIWQGVVLALFGVFVIGL--VDNVLRPIL 298
            A ++  L ++  +G  +   PV  +   S    +  + ALF + +I L  +DNV++PIL
Sbjct: 259 IAFVVLILCIIQ-IGPALALLPVIVWAWTS---MEFGMAALFTILLIPLLIIDNVMKPIL 314

Query: 299 VGKDTKMPDYLILISTLGGLSVFGLNGFVIGPLVAALFMS 338
           V +    P  +IL+  LGG   +GL G  +GP+V ++F S
Sbjct: 315 VARGLSTPTLVILLGVLGGTLSYGLIGLFLGPIVLSVFHS 354