Pairwise Alignments

Query, 355 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 336 a.a., AI-2E family transporter from Methanococcus maripaludis S2

 Score = 88.2 bits (217), Expect = 3e-22
 Identities = 79/336 (23%), Positives = 149/336 (44%), Gaps = 27/336 (8%)

Query: 7   QFKTLLLLLGLVTIAFIWIL-LPFYGAVFWAVILGIIFAPMQRRLQQRFGWNRNLTSLAT 65
           +++ L+ +  L++   + I+  PF   + +A     +  P    L++  G  R L ++  
Sbjct: 5   EYRFLMRIFVLISFLSVMIIAFPFLDTIAFACAFAYMTEPFFSALKKYTG--RTLGAIL- 61

Query: 66  LSACLIIAILPVIITSALLVQEGATLYKNIESGKLDVAGYIE---QFKNVLPPYFQHLLD 122
              C+++  +P II   L++ +   +++ + S  LD AG+++   QF N +       L 
Sbjct: 62  ---CILMITVPAIILVFLILTD---IFEFLNS--LDYAGFVDYTVQFINYIG------LQ 107

Query: 123 RFGMGNLEGLREKIVKSAMQGSQFFATQAFSFGQGTFDFLVSFFIMLYLLYFLLRDGPEL 182
                +L  +  +I           A Q +    G     +   + ++L Y+ L+DG   
Sbjct: 108 NIAKEDLSSILSEIWNFLKPTVNKMAGQIY----GLPLLFIKGLVTVFLTYYFLKDGYRF 163

Query: 183 VRKVRTAVPLAEPQKRRLQL-KFNRVVRATVKGNVLVAVTQGALGGLIFWFLDIPSALLW 241
              V   VP     +  L + K +   +     N L A T G +    FW + +P+ +  
Sbjct: 164 KDAVMPHVPEVYHVQTELFIRKLHEAYKNLFVVNALTAFTVGLISIAGFWAIGLPNPVTL 223

Query: 242 AVLMAFLSLLPAVGAGIVWGPVAAYFLLSGAIWQGVVLALFGVFVIGLV-DNVLRPILVG 300
             L   L+LLP VG   ++ P++ Y++  G   + ++L  FGV  + L  D V+RP LV 
Sbjct: 224 GALSGILTLLPIVGGWTIYMPLSVYYIAVGMYSKAILLFGFGVLFLSLAPDFVIRPRLVN 283

Query: 301 KDTKMPDYLILISTLGGLSVFGLNGFVIGPLVAALF 336
            ++ +     L++ L G    G+ GF +GPL+   F
Sbjct: 284 HESSIHPAFALVAFLMGPLALGITGFALGPLIMGTF 319