Pairwise Alignments

Query, 284 a.a., glutamine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 275 a.a., extracellular solute-binding protein family 3 (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  104 bits (260), Expect = 2e-27
 Identities = 73/241 (30%), Positives = 126/241 (52%), Gaps = 13/241 (5%)

Query: 29  AAAVSAIDRIKARDKLIVGVFTDKPPFGFVNEAGRYVGFDTDIGRQFAKDLLGDENKVEF 88
           A A    DRI+   K+ +G+ TD  P  F NE G + GFD D+  + AK + G E  +E 
Sbjct: 21  AMAGPVFDRIQKEKKIRIGIMTDSIPGAFYNEKGEWGGFDYDMATEVAKRM-GVE--IER 77

Query: 89  VAVEPASRIPFLQSDKVDLILANMTVTPERKEAVDFTNPNLKVAVQALVPNDSAVKSLND 148
           V V   +RI  +QS ++DL ++NMT T ER ++VDF+        Q ++      KS+ D
Sbjct: 78  VQVNNKTRIALVQSGQIDLSVSNMTHTRERDKSVDFSLTYFFDG-QKILAKKGQFKSVKD 136

Query: 149 LATRTTIVTTGTTADIWLTKN-------HPDWKLLKFEKNSESLQALSAGRGDAYAQDNL 201
           +  +      GTT+++ + +        + +  ++ F+K SE  QAL  GR   ++ D  
Sbjct: 137 MVGKKIATMQGTTSEVNVRRALKEAGDPNAETNVISFQKESECFQALQNGRVAGWSTDAS 196

Query: 202 VLFSWAKQNPG-YRVLEEKLGDEAPIAPAVKKGNIELRDWVNAELAKLGEEKFLLKLYDQ 260
           +L  +A + PG + ++ + L DE P   A+ + +  LRD VNA +  + ++     +Y++
Sbjct: 197 ILVGYAAKTPGQFELVGDFLSDE-PYGMAMPQDDSALRDAVNAAIQDMWKDGTYKSIYNK 255

Query: 261 Y 261
           +
Sbjct: 256 W 256