Pairwise Alignments

Query, 284 a.a., glutamine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 283 a.a., glutamine-binding protein glnH from Bifidobacterium breve UCC2003

 Score =  200 bits (509), Expect = 3e-56
 Identities = 110/283 (38%), Positives = 156/283 (55%), Gaps = 8/283 (2%)

Query: 1   MKKLLLPLFAVALLAGCDKKAEEPTKPAAAAVSA-----IDRIKARDKLIVGVFTDKPPF 55
           +KK L  + A   L         P   A    S+     +++IK   K+ +  F D PP+
Sbjct: 4   VKKALAGVLAGVTLISVAACGNGPDPAAGGGSSSQQGQTVEQIKKTGKIRIATFGDLPPY 63

Query: 56  GFVNEAGRYVGFDTDIGRQFAKDLLGDENKVEFVAVEPASRIPFLQSDKVDLILANMTVT 115
           G+V   G   G+D  +G Q  KDL     KV++V V    R+  L+SDKVDL+LAN TVT
Sbjct: 64  GYVKNDGTRAGYDVALGNQIGKDL---GVKVDWVQVNADGRVDSLKSDKVDLVLANFTVT 120

Query: 116 PERKEAVDFTNPNLKVAVQALVPNDSAVKSLNDLATRTTIVTTGTTADIWLTKNHPDWKL 175
            ERK+ VDF +P +KV++  + P+ + + S + L  +   VT GTTA+ + T+ +PD +L
Sbjct: 121 DERKQVVDFADPYMKVSIGVVSPDSAKITSADQLKGKQLAVTKGTTAEAFFTEKYPDVQL 180

Query: 176 LKFEKNSESLQALSAGRGDAYAQDNLVLFSWAKQNPGYRVLEEKLGDEAPIAPAVKKGNI 235
            KF+  ++  QA   GR  A A DN  L++WAK NPGY V  + +GDE+ IAPAVKKGN 
Sbjct: 181 QKFDSKTQQFQAFKDGRVAALADDNTYLYAWAKDNPGYTVGIKTIGDESTIAPAVKKGNK 240

Query: 236 ELRDWVNAELAKLGEEKFLLKLYDQYVRKELSDDTKPESVIVE 278
            L +W N E+  L    F    Y   +    + D KPE VI+E
Sbjct: 241 SLLEWTNKEIKTLTSNGFFKDAYQSELAPSFTSDIKPEDVIIE 283