Pairwise Alignments
Query, 520 a.a., histidine kinase from Pseudomonas simiae WCS417
Subject, 1071 a.a., Diguanylate cyclase/phosphodiesterase from Sinorhizobium meliloti 1021
Score = 150 bits (379), Expect = 2e-40
Identities = 87/248 (35%), Positives = 116/248 (46%), Gaps = 7/248 (2%)
Query: 8 VVDALPGVAFTALADGNVDYVNQGWCAYTGRSANAATGSGWLAAVHPDDLPATLNSWREA 67
+VD P V +TA G V V W TG GSGW AVHP D A WR +
Sbjct: 148 LVDLHPQVPWTADTAGEVLEVGPRWSELTGLGEKETLGSGWAKAVHPQDAGALQEEWRRS 207
Query: 68 VRNGEPYRKELRLQQADGGYRWFVSDGKPMRDNHDRIIRWWVVSVDIDEHKRDKALIAHA 127
+ +G P+ E RL G YRWF + RD +I+RW+ V DIDE +R A
Sbjct: 208 LASGAPFDCEYRLLTKTGDYRWFRARAAAKRDADGKIVRWYGVLEDIDERRR-------A 260
Query: 128 LAEVSASEDRLSNIINAIPGFVWSAAPDGSVGFVNQRWCDYTGMSLDEARGNGWARSVHP 187
++ SE R I + P +W A P G F N+ W + TG + EA G GW +HP
Sbjct: 261 ADDLRESEARFRAIADDAPVMIWVADPTGDTSFFNRLWLETTGQTEAEALGFGWVDVIHP 320
Query: 188 DDAEQLARYWGALLRSGEAGEYEARLRRFDGDYRWFLVRAVPQRDEWGAVLRWYGENTDI 247
DD + + + E E RLRR DG + W + P+ G L + G DI
Sbjct: 321 DDRQAVQETFFRATAGKEPVRSEYRLRRADGSWAWVIDVGQPRFSADGTFLGYVGSVLDI 380
Query: 248 EDRKRAEM 255
+R+ AE+
Sbjct: 381 TERRAAEI 388
Score = 107 bits (266), Expect = 3e-27
Identities = 71/253 (28%), Positives = 112/253 (44%), Gaps = 13/253 (5%)
Query: 5 FDRVVDALPGVAFTALADGNVDYVNQGWCAYTGRSANAATGSGWLAAVHPDDLPATLNSW 64
F R++D + ++N C G+ N G + + ++
Sbjct: 17 FQRLMDGIAEPVIIKDDASRFVFINDAACDLLGKDRNQLIGRTDHDILPGEQADRIVSLD 76
Query: 65 REAVRNGEPYRKELRLQQADGGYRWFVSDGK----PMRDNHDRIIRWWVVSVDIDEHKRD 120
R + E + E ++ DG R ++ + P ++ + V VDI +R
Sbjct: 77 RIVLSTSEGHELEEQITTPDGTQRTLLTKKRCVSIPAGSTQEKFVV--VTIVDITNLRRT 134
Query: 121 KALIAHALAEVSASEDRLSNIINAIPGFVWSAAPDGSVGFVNQRWCDYTGMSLDEARGNG 180
+ + ASE+ ++++ P W+A G V V RW + TG+ E G+G
Sbjct: 135 EETLR-------ASEEHYRSLVDLHPQVPWTADTAGEVLEVGPRWSELTGLGEKETLGSG 187
Query: 181 WARSVHPDDAEQLARYWGALLRSGEAGEYEARLRRFDGDYRWFLVRAVPQRDEWGAVLRW 240
WA++VHP DA L W L SG + E RL GDYRWF RA +RD G ++RW
Sbjct: 188 WAKAVHPQDAGALQEEWRRSLASGAPFDCEYRLLTKTGDYRWFRARAAAKRDADGKIVRW 247
Query: 241 YGENTDIEDRKRA 253
YG DI++R+RA
Sbjct: 248 YGVLEDIDERRRA 260
Score = 87.8 bits (216), Expect = 2e-21
Identities = 73/271 (26%), Positives = 118/271 (43%), Gaps = 9/271 (3%)
Query: 5 FDRVVDALPGVAFTALADGNVDYVNQGWCAYTGRSANAATGSGWLAAVHPDDLPATLNSW 64
F + D P + + A G+ + N+ W TG++ A G GW+ +HPDD A ++
Sbjct: 271 FRAIADDAPVMIWVADPTGDTSFFNRLWLETTGQTEAEALGFGWVDVIHPDDRQAVQETF 330
Query: 65 REAVRNGEPYRKELRLQQADGGYRWFVSDGKPMRDNHDRIIRWWVVSVDIDEHKRDKALI 124
A EP R E RL++ADG + W + G+P R + D +V SV +D +R A I
Sbjct: 331 FRATAGKEPVRSEYRLRRADGSWAWVIDVGQP-RFSADGTFLGYVGSV-LDITERRAAEI 388
Query: 125 AHALAEVSASEDRLSNIINAIPGFVWSAAPDGSVGFVNQRWCDYTGMSLD-EARGNGWAR 183
A A+ + +I ++ P V +G +N+ G++ G W
Sbjct: 389 AQQEAQAF-----IRSIFDSSPDCVRVLDMEGRPLLMNEAGRRIFGLNEGAPVTGQTWDS 443
Query: 184 SVHPDDAEQLARYWGALLRSGEAGEYEARLRRFDGDYRWFLVRAVPQRDEWGAVLRWYGE 243
DA+++ W + +R G+ +E +R G+ R V + P D G R
Sbjct: 444 IGRASDADKVEAAWES-VRRGKTARFEISVRDAGGEERCMDVISAPITDHHGKPFRILSI 502
Query: 244 NTDIEDRKRAEMLAASIAVERQLSEETLSKV 274
DI D KRA + + + + LS V
Sbjct: 503 WRDITDAKRASDEISRAQRHAEAAADQLSSV 533
Score = 56.2 bits (134), Expect = 6e-12
Identities = 61/245 (24%), Positives = 102/245 (41%), Gaps = 35/245 (14%)
Query: 44 TGSGWLAAVHPDDLPATLNSWREAVRNGEPYRKELRLQQADGGYRWFVSDGKPMRDNHDR 103
TG W + D +W E+VR G+ R E+ ++ A G R P+ D+H +
Sbjct: 437 TGQTWDSIGRASDADKVEAAW-ESVRRGKTARFEISVRDAGGEERCMDVISAPITDHHGK 495
Query: 104 IIRWWVVSVDIDEHKRDKALIAHALAEVSASEDRLSNIINAIPGFVWSAAPDGSVGFVNQ 163
R + DI + KR I+ A A+ D+LS+++ + V D V ++N+
Sbjct: 496 PFRILSIWRDITDAKRASDEISRAQRHAEAAADQLSSVLESTMDSVMLLDADWRVRYLNE 555
Query: 164 RWCDYTGMSLDEARGNGWARSVHPDDAEQLARYWGALLRSGEAGEYEARLRRFDGDY--- 220
+ DEA G + + ++ A++ ++ + R+R F D+
Sbjct: 556 NARKLLQVG-DEALGRVFWKLFPEEEEGSFAKHCREVM--------DRRVRSFFEDHLSS 606
Query: 221 --RWFLVRAVPQRDEWGAVLRWYGENTDIEDRKRAEMLAASIAVERQLSEETLSKVRSEL 278
RW A P RD R DI +R+RAE E+TL + ++
Sbjct: 607 LGRWVEANASPTRDGISIFCR------DITERRRAE-------------EDTL-LAQKQM 646
Query: 279 AHLAR 283
AH+AR
Sbjct: 647 AHMAR 651