Pairwise Alignments
Query, 520 a.a., histidine kinase from Pseudomonas simiae WCS417
Subject, 1229 a.a., two-component sensor histidine kinase from Sinorhizobium meliloti 1021
Score = 285 bits (730), Expect = 5e-81
Identities = 176/517 (34%), Positives = 263/517 (50%), Gaps = 40/517 (7%)
Query: 4 EFDRVVDALPGVAFTALADGNVDYVNQGWCAYTGRSANAATGSGWLA--AVHPDDLPATL 61
+ +++++A+P + G + YV++ + G LA HPDD P
Sbjct: 736 QLEQMIEAVPFSTLSFAPTGELTYVSKRYQDQAGAPGAEIKDFDALAREVAHPDDFPTMF 795
Query: 62 NSWREAVRNGEPYRKELRLQQADGGYRWFVSDGKPMRDNHDRIIRWWVVSVDIDEHKRDK 121
+ G+P+ R + DG YRW + +P+R I++W+ S+DI+E R +
Sbjct: 796 ARATQGFATGQPFVNRFRRRLKDGNYRWIEARAQPLRRADGPIVQWYFASIDIEEEMRAQ 855
Query: 122 ALIAHALAEVSASEDRLSNIINAIPGFVWSAAPDGSVGFVNQRWCDYTGMSLDEARGNGW 181
AL E E L ++ +P + AAP+G + +Q+ D+ G L+E G
Sbjct: 856 ----EALRE---RERFLWQLVETLPAMIDCAAPNGEPVYRSQQLRDFLGYELEELDGGAK 908
Query: 182 AR-------SVHPDDAEQLARYWGALLRSGEAGEYEARLRRFDGDYRWFLVRAVPQRDEW 234
+R VHPDD + + L SGE + RLRRFDG+YRW RA P RDE
Sbjct: 909 SRLDATLDAGVHPDDLAGVKEQYARSLESGEPYRRKHRLRRFDGEYRWIETRAAPMRDEK 968
Query: 235 GAVLRWYGENTDIEDRKRAEMLAASIAVERQLSEETLSKVRSELAHLARVASLSTVTASI 294
GA+++W D++ R + E L + LA + ASL+ ++ASI
Sbjct: 969 GAIVQWNVICLDVDREVRMQ--------------EELRLAQERLARAGQAASLAELSASI 1014
Query: 295 AHEVNQPLAGIITNASTCLRMLGADPPNVTGALETARRTIRDGNRAAEVINRLRALFSKK 354
AHEVNQPLA I+ N+ C R L ADP N+ A T R IRD AA+V++R+RALF +
Sbjct: 1015 AHEVNQPLAAIVANSHACYRWLSADPVNIERAKITTERVIRDAKSAADVVSRIRALFKQS 1074
Query: 355 CITLEPVDLNEAAREVIAMLLGELQRNDVKLHPEFADALPTVKADRVQLQQVILNMILNA 414
+ L++ E +++ E R ++L+ + L V DR+Q+QQV++N+I N
Sbjct: 1075 VENRGILVLSDVISEACSLVAAEALRRRIRLNIDVETNLAPVTVDRIQVQQVLVNLIRNG 1134
Query: 415 TEAMNTMTGRSRHLHVTTGLDEHQ---GVYLAVKDNGNGFDPRDAERLFQAFYTTKTTGM 471
EAM+ + T + HQ V + + DNGNG ER+F+ F+TTK GM
Sbjct: 1135 MEAMDAVDDNK-----TVDVRMHQVDDEVRIEIGDNGNGV--AFPERIFEPFFTTKENGM 1187
Query: 472 GIGLSISRSIIERHDGVLWATAHSGPGATFQFALPRM 508
G+GL+ISRSI+E H G LWA + GA F F LP +
Sbjct: 1188 GMGLAISRSIVEAHGGRLWAEKNEPRGARFVFTLPNV 1224
Score = 124 bits (312), Expect = 2e-32
Identities = 83/260 (31%), Positives = 126/260 (48%), Gaps = 16/260 (6%)
Query: 4 EFDRVVDALPGVAFTALADGNVDYVNQGWCAYTGRSANAATGSGWL-------AAVHPDD 56
EF ++V+ +P + DG +++NQ + G A G A VHPDD
Sbjct: 603 EFSQLVNMVPSYLWRLTPDGVPNFLNQRLIDFLGPDVVNANVEGVHPLAAIIGAVVHPDD 662
Query: 57 LPATLNSWREAVRNGEPYRKELRLQQADGGYRWFVSDGKPMRDNHDRIIRWWVVSVDIDE 116
N+ +V GE + + RL++ADG YRW +PMRD RI++W+ +S DID+
Sbjct: 663 KTRMSNALFHSVATGERFSMKYRLRRADGVYRWVEGSAEPMRDEEGRILQWYGLSHDIDD 722
Query: 117 HKRDKALIAHALAEVSASEDRLSNIINAIPGFVWSAAPDGSVGFVNQRWCDYTGMSLDEA 176
I H + S+ +L +I A+P S AP G + +V++R+ D G E
Sbjct: 723 -------IMHVEEALRNSKQQLEQMIEAVPFSTLSFAPTGELTYVSKRYQDQAGAPGAEI 775
Query: 177 RG-NGWARSV-HPDDAEQLARYWGALLRSGEAGEYEARLRRFDGDYRWFLVRAVPQRDEW 234
+ + AR V HPDD + +G+ R R DG+YRW RA P R
Sbjct: 776 KDFDALAREVAHPDDFPTMFARATQGFATGQPFVNRFRRRLKDGNYRWIEARAQPLRRAD 835
Query: 235 GAVLRWYGENTDIEDRKRAE 254
G +++WY + DIE+ RA+
Sbjct: 836 GPIVQWYFASIDIEEEMRAQ 855
Score = 92.8 bits (229), Expect = 7e-23
Identities = 71/244 (29%), Positives = 106/244 (43%), Gaps = 20/244 (8%)
Query: 69 RNGEPYRKELRLQQADGGYRWFVSDGKPMRDNHDRIIRWWVVSVDIDEHKRDKALIAHAL 128
R E +++E R+ + DG V D+ + V +DI E KR A
Sbjct: 545 RGEEVFQEETRVARMDGSVMDVVFAIAQPGAIADKSL---VGFIDITERKR-------AE 594
Query: 129 AEVSASEDRLSNIINAIPGFVWSAAPDGSVGFVNQRWCDYTGMSLDEARGNG-------W 181
+ A E S ++N +P ++W PDG F+NQR D+ G + A G
Sbjct: 595 EALRAREREFSQLVNMVPSYLWRLTPDGVPNFLNQRLIDFLGPDVVNANVEGVHPLAAII 654
Query: 182 ARSVHPDDAEQLARYWGALLRSGEAGEYEARLRRFDGDYRWFLVRAVPQRDEWGAVLRWY 241
VHPDD +++ + +GE + RLRR DG YRW A P RDE G +L+WY
Sbjct: 655 GAVVHPDDKTRMSNALFHSVATGERFSMKYRLRRADGVYRWVEGSAEPMRDEEGRILQWY 714
Query: 242 GENTDIEDRKRAEMLAASIAVERQLSEETLSKVRSELAHLARVASLSTVTASIAHEVNQP 301
G + DI+D E ++ +Q E+ + V A L+ V+ + P
Sbjct: 715 GLSHDIDDIMHVE---EALRNSKQQLEQMIEAVPFSTLSFAPTGELTYVSKRYQDQAGAP 771
Query: 302 LAGI 305
A I
Sbjct: 772 GAEI 775
Score = 83.2 bits (204), Expect = 5e-20
Identities = 46/138 (33%), Positives = 71/138 (51%), Gaps = 7/138 (5%)
Query: 124 IAHALAEVSASEDRLSNIINAIPGFVWSAAPDGSVGFVNQRWCDYTGMSLDEARGNGWAR 183
+ ++A + E LS I+N +P + P+G F N+R D+ G+ L + +R
Sbjct: 301 LQQSVATLRERERELSQIVNMVPVHIRRLTPEGEPTFFNKRLTDFFGLDLQQLEKPNASR 360
Query: 184 -------SVHPDDAEQLARYWGALLRSGEAGEYEARLRRFDGDYRWFLVRAVPQRDEWGA 236
VHPDDA+ L + L +GE + R+RR DG YRW RA P RD+ G
Sbjct: 361 LVTAVQTLVHPDDADSLLQAVRRSLATGEPYSIKYRMRRADGAYRWVDGRAEPLRDDSGT 420
Query: 237 VLRWYGENTDIEDRKRAE 254
+L+W+ + DI+D R +
Sbjct: 421 ILQWFAISIDIDDEVRMQ 438
Score = 74.7 bits (182), Expect = 2e-17
Identities = 71/245 (28%), Positives = 108/245 (44%), Gaps = 35/245 (14%)
Query: 52 VHPDDLPATLNSWREAVRNGEPYRKELRLQQADGGYRWFVSDGKPMRDNHDRIIRWWVVS 111
VHPDD + L + R ++ GEPY + R+++ADG YRW +P+RD+ I++W+ +S
Sbjct: 369 VHPDDADSLLQAVRRSLATGEPYSIKYRMRRADGAYRWVDGRAEPLRDDSGTILQWFAIS 428
Query: 112 VDIDEHKRDKALIAHA--------------LAEVSASE-------------DRLSNIINA 144
+DID+ R + + + LA++ A + L ++
Sbjct: 429 IDIDDEVRMQEALKQSERRYRELFHYMPIGLAQIDAGKLIPMFKEMRAQGVVSLETYMDE 488
Query: 145 IPGFVWSAAPDGSVGFVNQRWCDYTGMSLDEARGNGWARSVHPDDAEQLARYWGALLRSG 204
P F+ A V VNQ D + E G R P A + R A R
Sbjct: 489 NPEFLSHALEALEVEEVNQHVIDMFRANSREEMGGSITRYWQPALA-TIRRSIEARYRGE 547
Query: 205 EAGEYEARLRRFDGDYRWFLVRAVPQRDEWGAVL-RWYGENTDIEDRKRAEMLAASIAVE 263
E + E R+ R DG +V A+ Q GA+ + DI +RKRAE A A E
Sbjct: 548 EVFQEETRVARMDGSV-MDVVFAIAQP---GAIADKSLVGFIDITERKRAE--EALRARE 601
Query: 264 RQLSE 268
R+ S+
Sbjct: 602 REFSQ 606