Pairwise Alignments

Query, 123 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

Subject, 241 a.a., Two component Transcriptional regulator, Winged helix family (NCBI) from Rhodospirillum rubrum S1H

 Score = 62.0 bits (149), Expect = 5e-15
 Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 1/112 (0%)

Query: 7   IAVVDDDESVRESLPDLLREFGFAVEAFSSAPAFLSSPHVAATRCLILDVAMPGMSGPEL 66
           IA+VDDD ++  S+   L   GF V  ++     L    +      +LD+ MP M G EL
Sbjct: 5   IALVDDDRNILTSVSMTLEAEGFRVVTYTDGAEALRGLSIEPVDLAVLDIKMPRMDGMEL 64

Query: 67  HTTLTLRGLAIPVIFITAHGDAGDRQKLMRTGVVDCLMKPFSEAQLLKALSA 118
              L  R  A+PVIF+T+  D  D    +R G  D + KPFS+  L++ + A
Sbjct: 65  LQKLRER-TAMPVIFLTSKDDEVDELLGLRMGADDYIKKPFSQRLLIERIRA 115