Pairwise Alignments

Query, 206 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 446 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 85.9 bits (211), Expect = 1e-21
 Identities = 49/141 (34%), Positives = 81/141 (57%), Gaps = 2/141 (1%)

Query: 8   VFVVDDDVSVRESLELLIRFAQWQPRLFESAQ-AFLSQPPADVPTCLVLDINLPDLNGLD 66
           VF++DD+  +R +L      A    + F S + A L+     +P  +V DI LP L+G +
Sbjct: 4   VFLIDDESDIRIALAQSFELADLNAQFFASVEEALLAIKAQGLPLVIVSDICLPGLSGQN 63

Query: 67  LQAAIANERPDTPIIFITGYGDIPLTVRAMKAGAVEFLTKPFNDDVLLTAIAGALEKSRT 126
           L +++ ++  + P+I ITG+GDI + V+AM  GA +F+ KPF  + L+  +  A+EK R 
Sbjct: 64  LLSSVLHQDSELPVILITGHGDISMAVKAMHDGAYDFIEKPFAPERLIDTVHRAIEKRRL 123

Query: 127 LLDQQDQLRVLRAAYATLTPR 147
            L+ +   R L+ +  TL PR
Sbjct: 124 TLENRQLKRSLKVS-QTLGPR 143