Pairwise Alignments

Query, 206 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 199 a.a., two component LuxR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  116 bits (291), Expect = 2e-31
 Identities = 66/199 (33%), Positives = 115/199 (57%), Gaps = 9/199 (4%)

Query: 5   QPI-VFVVDDDVSVRESLELLIRFAQWQPRLFESAQAFLSQPPADVPTCLVLDINLPDLN 63
           QP+ +++VDDD +V +SL  ++R   ++   F S   FL +     P C++LD  +P ++
Sbjct: 7   QPMPLYLVDDDEAVLDSLSFMLRQFGYEMTTFVSGLRFLEEVDLSRPGCVILDSRMPAIS 66

Query: 64  GLDLQAAIANERPDTPIIFITGYGDIPLTVRAMKAGAVEFLTKPFNDDVLLTAIAGALEK 123
           G  LQ  +  ++    IIF+TG+GD+P+ V A + GA +F  KP +      A+A A++K
Sbjct: 67  GQALQQELLTKQSPLGIIFLTGHGDLPMAVNAFRQGACDFFQKPVSGQ----ALAAAIDK 122

Query: 124 SRTLLDQQDQLRVLRAAY--ATLTPREQEVMTRVVAGHMNKVIAADLAISEITVKAHRGK 181
           S  +L  Q     L+ ++  ATL+ RE +V+  ++ G  NK ++  L +S  T++ HR  
Sbjct: 123 S--MLHSQKAFEALQLSHNLATLSDREHQVLELLIQGKTNKQLSEALFLSLRTIEVHRSN 180

Query: 182 TMRKMKARSLADLVKMAAL 200
            M+K+K  +LA+L K + +
Sbjct: 181 VMKKLKVHNLAELAKYSQI 199