Pairwise Alignments

Query, 559 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  241 bits (616), Expect = 5e-68
 Identities = 142/363 (39%), Positives = 213/363 (58%)

Query: 197 VQKRMEGVLLSILGVAVVLLLVIAAVGMLLANTILRPLHLMKANLDDIAAGEGDLTRRLA 256
           +++ +  +L+  +G+ + +LLV+A +        L  L  +   L DIA G+GDLTRRL 
Sbjct: 277 LEQPLNDMLMVQIGIGLGILLVMALLTSWFVARQLNELGNIANALADIAEGDGDLTRRLD 336

Query: 257 ITSQDELGDLAGAFNRFVDKIHGLVRQITEMTSQLTGLVSQVSDQAQRSEQAMERQRHET 316
           + SQDE+G LA  FN+FVD++H +V+ + E++  LT      +  A ++ + +  Q+ E 
Sbjct: 337 VRSQDEVGLLADKFNKFVDRLHQMVKNVREVSVALTQGADHAAASATQASKRIRTQQDEI 396

Query: 317 DQVATAINQMSSAAQEVARSAQGASVAAQQTDAEGQAAKRVVDGSIAQIHALVNDIRSSG 376
             VATA+ +M+SA  E+A +A+  +  A Q+   G+     +  S   I  L  ++  + 
Sbjct: 397 TMVATAVTEMASATAEIASNAENTAKNATQSVQLGEDGFAQMQQSKQSIDQLAQELTGAV 456

Query: 377 VSLDSLQQDVSSIVSVLSVIRSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAS 436
             +  L+   + I ++LS IR IAEQTNLLALNAAIEAARAGE GRGFAVVADEVR L+ 
Sbjct: 457 RIISELEVHANEISTILSTIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQ 516

Query: 437 RTQTSTQEIQGMIDRLQTGTEAAVEAMRRSSDAGDGTSAQANEAGASLDTMAQLIGTINS 496
           RT  ST+EIQ  I  LQ  T  AV  M  S    + + A  N+ GASL  +++ I  I+ 
Sbjct: 517 RTHASTEEIQTKIAGLQKVTTTAVSVMTESHKLVETSVADVNQTGASLQAISEAIQQISD 576

Query: 497 MNAQIASAAEEQTAVAEEINRSVHQIAVAVDSVADETQLGAQTSRSLAELGQRLGQLVGQ 556
           M  QIASAAEEQ+ V  +IN +   +    D +A+E Q   Q ++SL  + Q L + + +
Sbjct: 577 MATQIASAAEEQSLVTADINVNTESVREVSDQLAEEAQQSVQQAKSLHAMAQELNKEISR 636

Query: 557 FRI 559
           F++
Sbjct: 637 FKL 639