Pairwise Alignments

Query, 559 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 643 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  256 bits (654), Expect = 2e-72
 Identities = 142/370 (38%), Positives = 225/370 (60%)

Query: 190 VAVVEAKVQKRMEGVLLSILGVAVVLLLVIAAVGMLLANTILRPLHLMKANLDDIAAGEG 249
           V V +A     ++  + + +   +VL+ +   V + + N I +PL  +K  + D+A G G
Sbjct: 273 VFVDKATALADVDVAVANAITTGIVLIGISVGVIIFIINQIYKPLLRLKVAVLDLAQGSG 332

Query: 250 DLTRRLAITSQDELGDLAGAFNRFVDKIHGLVRQITEMTSQLTGLVSQVSDQAQRSEQAM 309
           DLTRRL +   D+L  ++  FNRF   +  ++ QI++ T  ++  + Q+S  A+ +EQ +
Sbjct: 333 DLTRRLEVNGNDDLAQISEGFNRFSGNLQNMMLQISDATQIISSSIEQLSQTAKENEQML 392

Query: 310 ERQRHETDQVATAINQMSSAAQEVARSAQGASVAAQQTDAEGQAAKRVVDGSIAQIHALV 369
                ETDQV TAI QMS +A+ VA S   ++   +    E Q +  +V+ +++ + +LV
Sbjct: 393 ISHSSETDQVVTAITQMSESARTVAESVTQSNQITEAASKEAQQSLVIVNNAVSTVTSLV 452

Query: 370 NDIRSSGVSLDSLQQDVSSIVSVLSVIRSIAEQTNLLALNAAIEAARAGEAGRGFAVVAD 429
           ND+ +   S+ ++ +D + I  VLSVI +I+EQTNLLALNAAIEAARAGE GRGFAVVAD
Sbjct: 453 NDVENMSESISNMNRDANKISEVLSVIGAISEQTNLLALNAAIEAARAGEQGRGFAVVAD 512

Query: 430 EVRALASRTQTSTQEIQGMIDRLQTGTEAAVEAMRRSSDAGDGTSAQANEAGASLDTMAQ 489
           EVRALA+RTQ ST EI  M+ +L  GT++ V AM R+      T+ + +E   SL+ M+ 
Sbjct: 513 EVRALAARTQNSTTEISDMLTKLLEGTDSVVGAMERTKQQCQTTADKTSEVSGSLNMMSA 572

Query: 490 LIGTINSMNAQIASAAEEQTAVAEEINRSVHQIAVAVDSVADETQLGAQTSRSLAELGQR 549
            +  I+ ++ QIA+A E+Q+ VA E++R++  I   V+S+    +     + SL+     
Sbjct: 573 SVSDIDDLSTQIAAATEQQSTVAAELSRNMLSIREIVESLVVSGRQTVGATESLSHSNHE 632

Query: 550 LGQLVGQFRI 559
           L QLVG+F++
Sbjct: 633 LEQLVGKFKL 642