Pairwise Alignments

Query, 559 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 629 a.a., Histidine kinase, HAMP region:Cache:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  268 bits (686), Expect = 4e-76
 Identities = 159/355 (44%), Positives = 224/355 (63%), Gaps = 5/355 (1%)

Query: 207 SILGVAVVLLLVIAAVGMLLANTILRPLHLMKANLDDIAAGEGDLTRRLAITSQDELGDL 266
           +I  + VV++++I  +G+L+   +++PLH M   + DIA GEGDLT+RLAITSQDE G+L
Sbjct: 278 AITAMVVVVVVIILLLGLLI-RVLMQPLHQMGRAMRDIADGEGDLTKRLAITSQDEFGEL 336

Query: 267 AGAFNRFVDKIHGLVRQITEMTSQLTGLVSQVSDQAQRSEQAMERQRHETDQVATAINQM 326
           A +FNRFV++IH  +R++    +QL  + ++V   +  S    ++Q + T+ VA AIN++
Sbjct: 337 AESFNRFVERIHTSIREVASTAAQLGEVATRVVKVSNASMGNSDQQANRTESVAAAINEL 396

Query: 327 SSAAQEVARSAQGASVAAQQTDAEGQAA--KRVVDGSIAQIHALVNDIRSSGVSLDSLQQ 384
            +AAQE+A++A  A  + Q +DA G A+  + VV  +I  ++ L   I  S V+++SL  
Sbjct: 397 GAAAQEIAQNA--ARTSQQSSDASGLASDGQNVVQQTIKAMNELSGKISESCVNIESLNG 454

Query: 385 DVSSIVSVLSVIRSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALASRTQTSTQE 444
             ++I  +L VI SI++QTNLLALNAAIEAARAGEAGRGFAVVADEVR LA RTQ S Q+
Sbjct: 455 KTANIGQILEVITSISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQDSAQQ 514

Query: 445 IQGMIDRLQTGTEAAVEAMRRSSDAGDGTSAQANEAGASLDTMAQLIGTINSMNAQIASA 504
           +Q MI+ LQ G   AV  M  S    + +   AN AG  L ++ + I  IN MN  +A+A
Sbjct: 515 VQTMIEELQVGARDAVTNMTESQRQSEDSVGIANLAGERLGSVTRRIEEINGMNQSVAAA 574

Query: 505 AEEQTAVAEEINRSVHQIAVAVDSVADETQLGAQTSRSLAELGQRLGQLVGQFRI 559
            EEQT+V E IN  +  I        D  +   +   SL E   RL QLVG FRI
Sbjct: 575 TEEQTSVVESINVDITHINTLNQLGVDNLRQTLEACNSLEEQAARLQQLVGSFRI 629