Pairwise Alignments

Query, 276 a.a., N-acetylmuramoyl-L-alanine amidase from Pseudomonas simiae WCS417

Subject, 263 a.a., amidase (AMPD protein) from Sinorhizobium meliloti 1021

 Score =  137 bits (345), Expect = 2e-37
 Identities = 90/235 (38%), Positives = 111/235 (47%), Gaps = 20/235 (8%)

Query: 37  SPNQNERIR-----FLVLHYTVFDDKNS-LDALTN--GTASAHYLAYSTPHKHHNLPVVL 88
           SPN  ER        ++LHYT  +   S LD L       S HY              + 
Sbjct: 16  SPNHGERAGGRRPDMIILHYTGMETAASALDWLCREESQVSCHYFVDEEGR-------IA 68

Query: 89  QLVPEAKRAWHAGVSHWGNRANLNDTSIGIEIVNAGFIEGPTGRLWFPYTEAQLALVKHL 148
           QLVPE +RAWHAG   W    ++N  SIGIEI NAG    P G   FP  EAQ+  V  L
Sbjct: 69  QLVPEERRAWHAGKGVWKGETDINSCSIGIEIANAGH---PGGLPDFP--EAQIEAVAEL 123

Query: 149 AADVIKRYAIEPQNVVGHSDIAPFRKSDPGPLFPWQALSEHGIGAWPDAVTVHKHLAGRP 208
             D  +R+ I P+ V+ HSDIAP RK DPG  FPW  L   G+G W +   V      + 
Sbjct: 124 CLDCGERWQITPERVLAHSDIAPIRKVDPGENFPWDVLFRRGVGHWVEPAPVRGGRFFQR 183

Query: 209 ESQTVDVSIVQRALATYGYTIPQSGVLDDETRQVIRAFQMHFRPAGISGIPDAET 263
                 V  +Q  L  YGY +  +G     T  V+ AFQ HFR + + GI D  T
Sbjct: 184 GDSGQPVEALQSMLLLYGYGVEITGDFCARTEGVVAAFQRHFRQSRVDGIADVST 238