Pairwise Alignments

Query, 440 a.a., sodium:proton antiporter from Pseudomonas simiae WCS417

Subject, 439 a.a., Na+/H+ antiporter NhaC (RefSeq) from Shewanella loihica PV-4

 Score =  503 bits (1295), Expect = e-147
 Identities = 257/440 (58%), Positives = 335/440 (76%), Gaps = 2/440 (0%)

Query: 2   INAVIAAVGTMLVLSLSRVHVVIAIIVGALVGGLTGGLGIDATLKAFNGGLGGGATVALS 61
           +NAV+ AV  ML LSL+RV+VVIA+ V ALV GL GG+ +D T+ AFN GLGGGA +ALS
Sbjct: 1   MNAVVIAVCLMLGLSLARVNVVIALTVSALVAGLVGGMNLDQTVDAFNTGLGGGAQIALS 60

Query: 62  YALLGAFAVAIAKSGLAHALADKALLLVDRQDASGG-GHVKWLLIGLLWVVAIASQNILP 120
           YALLGAFAVA++ SGL   ++ K +  + ++++ G    V+W L+  +  +A++SQNILP
Sbjct: 61  YALLGAFAVALSHSGLTTLISRKVIAQLGQEESPGNVNKVRWFLLLAILAMAVSSQNILP 120

Query: 121 IHIAFIPLLVPPLLYVLTKLQLDRRLIACVMTFGLITPYMFLPVGFGNIFLNQILLANVA 180
           IHIAFIP+L+PPLL+V++KL+LDRRL+ACV+TFGL+T YM LPVGFG IFLN ILL+N+ 
Sbjct: 121 IHIAFIPILIPPLLHVMSKLKLDRRLVACVLTFGLVTTYMILPVGFGGIFLNDILLSNLT 180

Query: 181 KSGVDISQVNVTHAMSLPALGMVVGLLVAVFISYRKKRVYDLEKIERVEQVAVQYNPLTL 240
            + +D  +  +  AM +PALGMVVGL +AVFISYRK R Y  E I   E      N   +
Sbjct: 181 SNNLDAVREQIPSAMLIPALGMVVGLFIAVFISYRKPREYKEELILAAEPEET-LNRRNI 239

Query: 241 LVAGLAIASAFIIQLWLDSMIIGALAGFLIFSVSGIVRWRDTDDLFTEGMKMMAMIGFIM 300
           ++A +AIAS   +QL+  SMI GAL GF+IFS SG ++     D+F +G++MMA IGFIM
Sbjct: 240 IIALVAIASTLAVQLYTGSMIFGALIGFIIFSFSGALKHVADQDIFNQGVRMMANIGFIM 299

Query: 301 IASSGFAEVLKATGDVRSLVETSAAFIGHNRGVGALLMLLVGLLVTMGIGSSFSTVPILA 360
           I+++GFA V+KATGDV +LV++ +  IG NR + A LML+VGLL+TMGIGSSFST+PI+A
Sbjct: 300 ISAAGFAAVVKATGDVGTLVDSLSHLIGDNRALAAFLMLVVGLLITMGIGSSFSTIPIIA 359

Query: 361 AIFVPLCVQLGFSPVAIVCIVGTAGALGDAGSPASDSTLGPTSGLNVDGQHHHIWDTVVP 420
            I+VPL +  GFS  A + +VGTA ALGDAGSPASDSTLGPT+GLN DGQH HI D+V+P
Sbjct: 360 TIYVPLAISFGFSVPATIALVGTAAALGDAGSPASDSTLGPTAGLNADGQHDHIRDSVIP 419

Query: 421 TFLHYNLPLLAFGWLAAMTL 440
           TF+HYN+PLL  GW+AAM L
Sbjct: 420 TFIHYNIPLLISGWIAAMVL 439