Pairwise Alignments

Query, 439 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 461 a.a., sensor histidine kinase from Sinorhizobium meliloti 1021

 Score =  142 bits (357), Expect = 3e-38
 Identities = 127/451 (28%), Positives = 220/451 (48%), Gaps = 39/451 (8%)

Query: 13  VSVMVIVGVVLAQTSLWLFEAGLQRYLEAGLRNDAENLLVALVRGPNGV-QLDEQRLSPA 71
           V  +V++GVV++       E G Q  L A L N   ++ V      +G  QL + R S  
Sbjct: 19  VVALVVIGVVISALYRQGSERGFQDLLRAQLYNVINSISVDEKAALSGSPQLGDLRFS-- 76

Query: 72  YQRPFSGHYFRID----FADTHWRSRSLWDQELPRLPEVGIKGNLQL-------GPEGQQ 120
             +P +G Y+ ++    F      S SL   +LP +    +  +++         P G +
Sbjct: 77  --QPQTGWYWIVEPIGEFDTPPLISTSLGTAKLPIVSVDEVPFDIRYERFYTTTDPFGNE 134

Query: 121 LLVLRSDYKRF--GQPISISVAQDYTPVRESF-RLMRQIGLVLGLAALLLVLILQRITVR 177
           + V  ++      G      VA +   +     R  R + + L +  L   L +  +T+ 
Sbjct: 135 VEVAETEVVLDIQGHAARFRVAGNRDVLEADIDRFTRNLTIALSIFGLG-GLGVNALTIL 193

Query: 178 RALRPLETARNQIAQLQQGQRSQLDTQVPLELEPLVAQINHLLAHTEDSLKRSRNALGNL 237
             L+PL+  R  + +++ G+  +LD   P E++PL  ++N L+      ++R+R  +GNL
Sbjct: 194 FGLKPLDQVRRSLEKIRTGESERLDGAFPREIQPLANEVNALIDSNRRIVERARMQVGNL 253

Query: 238 GHALKTPLAVLLSAASSDALKDRPELSKLLRDQLEHVQQRLNRELNRARLAGETLPGVLF 297
            H+LKTP+AVLL+ A    + + P   +L+R Q + +Q ++   L+RAR+A +   G + 
Sbjct: 254 AHSLKTPIAVLLNEA---RVLEVPH-GELVRAQADAMQTQVQSYLSRARIAAQR--GSVL 307

Query: 298 DCEKELPGLLATLSMIHGEHLDLNYHAA---SGLQLPWDREDLLELLGNLLDNACKWADA 354
              +  P L   + ++   + D  +  +    GL L  +++D+ E +GNLL+NA ++A  
Sbjct: 308 ARTEAQPALERIMRVMRRLNPDKQFSLSINPPGLVLAMEQQDVEETVGNLLENAARYAHD 367

Query: 355 EVRLTV---------TETGRNYL-LAVEDDGPGIPETQRDQVFSRGTRLDEQIHGHGLGL 404
            + L V          E GR ++ L ++DDGPG+   Q      RG RLDE   G GLGL
Sbjct: 368 RISLNVEPAPEDAREREPGRQWIVLQIDDDGPGLDPDQIAVAMKRGKRLDESKPGTGLGL 427

Query: 405 GIVRDIVEVWGGVLQLQESELGGLKVLIELP 435
            IV +IV  + G ++L   ++GGL+  + LP
Sbjct: 428 SIVSEIVGEYQGSVELSRRDVGGLRATLVLP 458