Pairwise Alignments

Query, 439 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 491 a.a., sensor kinase CusS (RefSeq) from Shewanella sp. ANA-3

 Score = 91.7 bits (226), Expect = 5e-23
 Identities = 97/375 (25%), Positives = 170/375 (45%), Gaps = 30/375 (8%)

Query: 84  DFAD-THWRSRSLWDQELPRLP-----EVGIKGNLQLGPEGQQLLVLRSDYKRFGQPISI 137
           DF++ +H R   LW  E P  P     E+ ++    +   GQ +   +         +SI
Sbjct: 115 DFSEHSHARDVFLWTVEDPARPMDTGSEMKMETYRIIASSGQAIFQGKQQNYVMLTGLSI 174

Query: 138 SVAQDYTPVRESFRLMRQIGLVLGLAALLLVLILQRITVRRALRPLETARNQIAQL-QQG 196
           +    Y        L + +  +  + +LL+VLI+ RI VR+   PL    N I  +  + 
Sbjct: 175 NFHLHYLDA-----LKKNLIAIAVVISLLIVLII-RIAVRQGHLPLRNVSNAIKSITSEN 228

Query: 197 QRSQLD-TQVPLELEPLVAQINHLLAHTEDSLKRSRNALGNLGHALKTPLAVLLSAASSD 255
             ++L+ T+VP+ELE LV   NH++   ED   R  N   ++ H ++TP+  L++     
Sbjct: 229 LDTRLEPTRVPIELEQLVISFNHMIGKIEDVFTRQANFSADIAHEIRTPITNLVTQTEIA 288

Query: 256 ALKDR--PELSKLLRDQLEHVQQRLNRELNRARLA----GETLPG-VLFDCEKELPGLLA 308
             +DR   EL  +L   LE   +      +   LA     + +P  V FD   E+  +  
Sbjct: 289 LSQDRTQKELEDVLYSSLEEYNRMTKMVSDMLFLAQADNNQLIPDRVRFDLRAEVMKVFE 348

Query: 309 TL-SMIHGEHLDLNYHAASGLQLPWDREDLLELLGNLLDNACKWADAEVRLTVT--ETGR 365
              +     ++ L ++    L +  D +     + NLL NA ++      +TV+  E   
Sbjct: 349 FFEAWAEERNITLKFNGMPCL-VEGDPQMFRRAINNLLSNALRYTPEGQAITVSIREQES 407

Query: 366 NYLLAVEDDGPGIPETQRDQVFSRGTRLD----EQIHGHGLGLGIVRDIVEVWGGVLQLQ 421
            + L +E+ G  IPE    ++F R  R+D     +  G G+GL IV+ IVE   G +Q+ 
Sbjct: 408 FFDLVIENPGKPIPEEHLSRLFDRFYRVDPSRQRKGEGSGIGLAIVKSIVEAHHGRVQV- 466

Query: 422 ESELGGLKVLIELPK 436
           ES++   + ++ +P+
Sbjct: 467 ESDVRSTRFILSVPR 481