Pairwise Alignments

Query, 219 a.a., glutamine ABC transporter permease from Pseudomonas simiae WCS417

Subject, 227 a.a., Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps from Pseudomonas fluorescens FW300-N2E2

 Score =  123 bits (309), Expect = 2e-33
 Identities = 72/209 (34%), Positives = 124/209 (59%), Gaps = 3/209 (1%)

Query: 10  WVSLPQLGKGAAQTLSISFLSIAFSTVGGVLYGVLRTLNNRLINAVLRVYLELFRAIPVL 69
           W +   LG   +  LS++  ++A + +G +L   +++ +  L +A +  +++  RA+P+L
Sbjct: 15  WSARLLLGARVSAELSLTGFALA-AMLGALLAWAMKSHSVWLKHAAV-FFIQGMRAVPLL 72

Query: 70  VWLYLLFFGLPIFFGLSLPSFWCAVLVLSLWGASEVGEVVRGALHSLPRGQREAGLSIGL 129
             L  L+F LP   GL+L  +W   + L L G++ V E++RG L SL RGQREA ++ GL
Sbjct: 73  ALLLALYFTLPSL-GLTLSGYWAGAIGLGLQGSAYVAEILRGGLDSLHRGQREAAIATGL 131

Query: 130 SDPQLYGYVLLPQALKRMTPPTLNVYTRIIKTSSLAVLIGVVDVIKVGQQIIERTYESVL 189
           +  Q +  V+ PQA++ M PP LN Y  I+K SSL  LI   +++   + I   ++  + 
Sbjct: 132 TPLQAFTAVIFPQAIRGMLPPLLNAYVSILKDSSLCALIATDELMLAARAIASESFLPMH 191

Query: 190 IYGVLFLFFFFICYPLSAASKVLERRWTQ 218
           I+ ++ LF+F I +PLS  S+ LE R+++
Sbjct: 192 IFLLVGLFYFVIAFPLSLLSRALEARFSR 220