Pairwise Alignments

Query, 221 a.a., polar amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 223 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  132 bits (332), Expect = 5e-36
 Identities = 76/217 (35%), Positives = 125/217 (57%), Gaps = 3/217 (1%)

Query: 1   MTFDFAFILSTLPAFLKAVGVTLQVGLIAIATSLLVALINAALLVFRTPYLSRLVALYVE 60
           M FDF ++L  LP  LK +G TL++    +  +L++AL  A + VF+ P L  L  LY+ 
Sbjct: 1   MGFDFHYMLELLPILLKYLGTTLEMASWGLVFALILALFLANIRVFKVPVLDPLSQLYIS 60

Query: 61  LARNTPLLIQLFFVYFALPA---LGFNISGFWAAIITLTFLGGAYLTEVLRAGVEAVPLA 117
             R TPLL+QLF +Y+ LP    L   +  F AA+I LT    AY+ E +RA +  +  +
Sbjct: 61  FFRGTPLLVQLFLLYYGLPQVFPLLVGLDAFSAAVIGLTLHFAAYMAESIRAAIIGIDRS 120

Query: 118 QVESGKSIGLSDWQLLRHVILPQAGILSLPALFANFIFLLKETTVVSAVAVPEILYTTKS 177
           Q+E+  S+G++  Q +R +ILPQA  ++LP+L   FI ++K T++   + V EI+   + 
Sbjct: 121 QMEASLSVGMTTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQM 180

Query: 178 YIALYYKTYEMLAVLTLICVLLFLPLSLLLSRLERRL 214
             +  ++ +E    + LI  ++ L L+ L S  E++L
Sbjct: 181 EASSSFRFFEAFLAVALIYWVVVLVLTRLQSWAEQKL 217