Pairwise Alignments

Query, 221 a.a., polar amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 337 a.a., amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  119 bits (297), Expect = 9e-32
 Identities = 66/207 (31%), Positives = 117/207 (56%), Gaps = 9/207 (4%)

Query: 16  LKAVGVTLQVGLIAIATSLLVALINAALLVFRTPYLSRLVALYVELARNTPLLIQLFFVY 75
           L+ + +TL+V ++AI   +++ ++     +   P L  L   Y+E+ R +PLL+Q+F  Y
Sbjct: 128 LEGLWITLEVSMLAIIIGIVLGVVTGLARISVNPALRWLAITYIEIIRGSPLLVQVFLWY 187

Query: 76  FALPAL--------GFN-ISGFWAAIITLTFLGGAYLTEVLRAGVEAVPLAQVESGKSIG 126
           F +  L        G + I   W  ++ L    GAY+ E++RAG+++V   Q+E+ +S+G
Sbjct: 188 FVVGTLLNALFEKVGLSAIPPLWYGVMALAIFTGAYVAEIVRAGIQSVHRGQMEAARSLG 247

Query: 127 LSDWQLLRHVILPQAGILSLPALFANFIFLLKETTVVSAVAVPEILYTTKSYIALYYKTY 186
           +S  Q +R VILPQA    +P L   FI L+K+++++  +AV E+   T+  +    + +
Sbjct: 248 MSYAQSMRKVILPQAFRRIMPPLAGQFISLVKDSSLLGVIAVRELTKATREVVTTSLQPF 307

Query: 187 EMLAVLTLICVLLFLPLSLLLSRLERR 213
           E+  V  L+ ++L   LSL +  LERR
Sbjct: 308 ELWIVCALLYLVLTFTLSLCVQYLERR 334