Pairwise Alignments

Query, 258 a.a., peptidoglycan-binding protein from Pseudomonas simiae WCS417

Subject, 391 a.a., LysM peptidoglycan-binding domain-containing protein from Vibrio cholerae E7946 ATCC 55056

 Score = 60.5 bits (145), Expect = 5e-14
 Identities = 57/233 (24%), Positives = 103/233 (44%), Gaps = 20/233 (8%)

Query: 28  PTTQHAIQRFLLHNRILDTPQDLDNAPYIVAADAGRVLGANGERVHARGDLEPSQPNYGI 87
           PT Q  +    L +  L     L  +  ++ +  GR      ++++  G    S+  +GI
Sbjct: 132 PTVQEGLVLPYLQSDRLMAKTALQGSVRVIGSSEGRQYLTKQDQLYISG--VHSEKKWGI 189

Query: 88  FRRGKVYT-DPQTRELLGINADDIGTARFVTAGDLTTLAVQRVTQEVRPGDRLLRAQTPV 146
           +R    Y  D +    L + A  +G    +T G+ + L++    QE+   D  L  +  +
Sbjct: 190 YREVAQYQRDDEVMVALRLVA--VGELA-MTGGNFSGLSLLEQNQEILANDIAL-PEVDL 245

Query: 147 DPAAFAVT----PATRFIKGQIIDIPKGVTQIGVLDAVTLNKGRRDGLVEGQLLSVIKAG 202
           +    + T    PA    + +I+   +G    G    V +++GR DG+ +G +  + +A 
Sbjct: 246 EERQLSTTFYPQPAPAGSEARILGSLEGSQYAGQNQVVVIDQGRSDGVAQGSMFELYQAA 305

Query: 203 ATVR---DSLT------GTPTQLPDERAGTLLVFRTYEKLSYGLVLNASRPLA 246
             V+   DS T       T  QLP  + G L+V R YE+ S  L+ N+S P++
Sbjct: 306 VQVKAKQDSSTFLSERSNTDVQLPSVKVGALMVIRPYERFSLALITNSSAPIS 358