Pairwise Alignments

Query, 367 a.a., DNA polymerase III subunit beta from Pseudomonas simiae WCS417

Subject, 390 a.a., DNA polymerase III subunit beta from Synechococcus elongatus PCC 7942

 Score =  151 bits (381), Expect = 3e-41
 Identities = 110/378 (29%), Positives = 188/378 (49%), Gaps = 16/378 (4%)

Query: 1   MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVEG--QQLSLTGTDLE--VELVGR 56
           M    ++  L   L LV+  V  R   PVL+NVLL  +   Q+LSLT  DL   ++    
Sbjct: 16  MKLVCRQNELNTSLSLVSRAVPSRPNHPVLANVLLAADAGTQRLSLTAFDLSLGIQTSFA 75

Query: 57  VQLEEPAEPGEITVPARKLMDICKSLPNDALIDIKVDEAKLVVKAGRSRFTLSTLPANDF 116
            Q+E     G IT+PA+ L DI   LPND+ + ++ ++A   +  G  ++ +  + A++F
Sbjct: 76  AQVERS---GAITLPAKLLNDIVSRLPNDSDVTLEDNDAAATLSVGSGQYQMRGISADEF 132

Query: 117 PTVEEGPGSLTCSLEQSKLRRLIERTSFAMAQQDVRYYLNGMLLEVSEGIIRAVATDGHR 176
           P +          L  S L   +  T FA +  + +  L G+ L+V    +   ATDGHR
Sbjct: 133 PELPLVQSQEALQLSASALIEGLRGTLFATSGDETKQILTGVHLKVQPDGLEFAATDGHR 192

Query: 177 LAMCSMRADIGQP-DRHQVIVPRKGILELARLLTEPEGNVSIVLGQHHIRATT----GEF 231
           LA+         P     V VP + + +L R++     + +I L  +H +  T    G+ 
Sbjct: 193 LAVVKTENAAATPATEFAVTVPSRALRDLERMIAIRGSDEAIAL--YHDQGQTVFQWGDQ 250

Query: 232 TFTSKLVDGKFPDYERVLPKGGDKLVLGDRQALREAFSRTAILSNEKYRGIRLQL--ANG 289
             TS+ +DG++P+Y +++P+  ++ V  DR+ L  A  R A+L++++   IRL L   N 
Sbjct: 251 YLTSRTLDGQYPNYGQLIPREFNRNVAVDRKRLLAALERIAVLADQQNNAIRLSLDPENN 310

Query: 290 QLKIQANNPEQEEAEEEVGVDYNGGSLEIGFNVSYLLDVLGVMTTEQVRLILSDSNSSAL 349
           +L +  +  +    +E V  +  G  LEI FNV YL + L  + T  +++ L+ + S  +
Sbjct: 311 RLALAVDAQDVGSGQEAVPAEIIGEPLEIAFNVRYLAEGLKALNTTDIQIQLNSNTSPVV 370

Query: 350 VQESDNDDSAYVVMPMRL 367
           +         Y+VMP++L
Sbjct: 371 LSPLGPVKITYLVMPIQL 388