Pairwise Alignments

Query, 260 a.a., methionine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 269 a.a., methionine ABC transporter substrate-binding protein MetQ from Vibrio cholerae E7946 ATCC 55056

 Score =  189 bits (479), Expect = 7e-53
 Identities = 106/259 (40%), Positives = 149/259 (57%), Gaps = 7/259 (2%)

Query: 6   LFTALAAALTASFAQANEKLV------VAATPIPHAEILELI-KPTLAKEGVDLQIKVFT 58
           L T  AAA T   A   EK V      +       A++ E+  K    K  +D+++  FT
Sbjct: 8   LLTIAAAASTLILAGCGEKAVDNNKVKIGVMAGAEAQVAEVAAKVAKEKYNLDVELVTFT 67

Query: 59  DYVQPNTQVAEKRLDANYFQTLPYLENFNKGKGTNLVTVVGVHVEPIGGYSKKIKNISEL 118
           DYV PN  + +  +DAN FQ  PYL+     +G  L  V    V PI GYSK+IK++ EL
Sbjct: 68  DYVTPNAALDDGSIDANAFQHKPYLDKQIADRGYKLAIVGNTFVYPIAGYSKQIKSVDEL 127

Query: 119 KDGATVAIPNEGSNSGRALLLLQKNGLITLKDPNNALSTPKDIASNPKNLKFKELESALL 178
           +DGA +A+PN+ +N GR+LLLLQ+ GL+ L++    L+T +DI  NPK L+  EL++A L
Sbjct: 128 QDGARIAVPNDPTNLGRSLLLLQQQGLLKLREDVGLLATVRDIVENPKKLEILELDAAQL 187

Query: 179 PRVLDQVDLDVINTNYALEAGLNPAKDALIIEDAKSPYVNFLVARPDNKDSDAIQKLSKA 238
           PR LD V L +INT YA    L P KD + +E+ +SPYVN LVAR  N +++ +Q   KA
Sbjct: 188 PRSLDDVALSIINTTYASSINLTPEKDGIFVENKESPYVNILVAREANVNAENVQNFKKA 247

Query: 239 LTSPEVKAFIEKKYNGAVV 257
             + EV     + + G  V
Sbjct: 248 YQTDEVAKAASEIFQGGAV 266