Pairwise Alignments

Query, 286 a.a., propanediol utilization protein from Pseudomonas simiae WCS417

Subject, 248 a.a., prophage MuSo2, transcriptional regulator, Cro/CI family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 50.1 bits (118), Expect = 5e-11
 Identities = 47/158 (29%), Positives = 79/158 (50%), Gaps = 16/158 (10%)

Query: 128 NEPASN-VITVDFSRPGQVGDEVWIAHYDVRAAMGGGQIPHEYPEMLQDIRVSPKHLRDL 186
           NEP S  VI ++        +   I  Y V+ + G G +  +  + ++ +    K L+  
Sbjct: 96  NEPGSKYVIGINLE------EYALIPGYRVQVSAGHGALNCDQQDPVRYLAFRRKWLKYR 149

Query: 187 GVTFKEHFHLKMITGWGQSMAPTIKDRDPLLVDITIREFTGDG-IYLFSHDEMLYVKRLQ 245
           G  F+EH  L ++   G SM PTI   D L+V +  R    DG IY+F + + L+VKR Q
Sbjct: 150 G--FEEH-ELAIVWAKGDSMEPTIHSNDTLVVHLG-RNSPADGHIYIFRNGDDLFVKRYQ 205

Query: 246 KKGKDRFKMISDNKHHDPEDIRVDDTH---ILARVLYV 280
                 +++ISDN  +D  DI   + H   ++ +V+++
Sbjct: 206 -NAFGSWRLISDNPVYDKLDIPKHEQHQFEVVGQVVHI 242