Pairwise Alignments

Query, 334 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 335 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score = 88.6 bits (218), Expect = 2e-22
 Identities = 85/322 (26%), Positives = 140/322 (43%), Gaps = 19/322 (5%)

Query: 21  LGLDSAALCLQAGLDPQKMDDPNARYPLSATTRLWELAVQASGDPAIGLRVSRFVSATTF 80
           LG +   +  QAGL   +  DPN          L E+A Q    P  GL +++     T 
Sbjct: 19  LGENPIEMIHQAGLRQAQFRDPNTYIAYPRLAELLEIAAQRCQHPLFGLMLAQ---RQTL 75

Query: 81  HALG---YALVASGSLREVFERIVRYHQVVSDALSLELSGDGERYRFRLLQLPGSPAPAF 137
           H LG     +  + ++ +   R+  Y  + +  +SL+L   GE  R  L     SP    
Sbjct: 76  HVLGDLPMLVSRAATVADALARVNDYLYLHASGVSLQLQSQGEIVRLALSMNVHSPRGIE 135

Query: 138 EAIDAFAAIYVRTCRNRLGREYAPLAVYLRRPEPVDPKPW---HTV-FRAPVFFDAEEDR 193
           + +    A       + L    + + +YL + +P + +     H+V FR P F       
Sbjct: 136 QLMQMSVAQLAMFVSSLLNINISNVPLYLCQNKPSEQESQRLTHSVRFREP-FNGVVVKA 194

Query: 194 LEFAAADFDSHLDDA-NPELAEHNETVLKRTLAQLQPLTWERKVRAAIEAQLPDGEPSAE 252
            +    ++  H ++A N  L  H + +  R      P     + R  I   LP GE   E
Sbjct: 195 SQLTGRNY--HDEEALNRHLQSHLQYLQSR-----YPDNLADQARDLIHRLLPTGECCIE 247

Query: 253 RIAQALHLSLRSLQRHLADEGCRFDALLSECRENLALLHLRDPHCSLAEISHLLGFADTS 312
           R++ AL L  R+LQ  L + G  +  LL + R+N+A   L     ++ E++  LG+A+ +
Sbjct: 248 RVSTALGLHERTLQTRLQETGQSYRQLLQDVRQNIAQQQLSYGTQTITELALQLGYAEVA 307

Query: 313 SFNRAFKRWTGMTPGQFRDGLR 334
            F+R FK WTG +P Q++   R
Sbjct: 308 VFSRHFKTWTGFSPKQWQQQYR 329