Pairwise Alignments

Query, 324 a.a., DeoR faimly transcriptional regulator from Pseudomonas simiae WCS417

Subject, 277 a.a., diaminopimelate epimerase from Methanococcus maripaludis JJ

 Score = 44.3 bits (103), Expect = 3e-09
 Identities = 55/241 (22%), Positives = 95/241 (39%), Gaps = 41/241 (17%)

Query: 67  DGLLVGPFQAEPPFDLMIVNTDGSLAERSGNGLTIFAQALTDQGLLSGACELRVHHDKS- 125
           DGL++        F + + N+DGS AE  GN +    + + D+ +           DKS 
Sbjct: 43  DGLVLILPSDVADFKMRMFNSDGSEAEMCGNAIRCVGKFVYDKKMT----------DKST 92

Query: 126 ---DAVSPVSTWVEPAIREQVAGFWLELGVPGFGPEVVGAQME----VDETELSHVSELA 178
              + ++ +          +V    +++G P    E +    E    +DE       E+ 
Sbjct: 93  ITIETLAGIKVLEMTVENGKVVLVKVDMGEPILKAEEIPVLSEKHPVIDE-------EIT 145

Query: 179 AINPQWAASQFVRVGNPHCVTLVEQVSALPDNTQMQQPALYEPLKTIAFAPPAGGGRPCP 238
           A +  +  +  V +GNPH +T +E VS  P         ++E                 P
Sbjct: 146 AKDYSYYFT-CVSMGNPHAITYIENVSEFPLEKIGPLFEIHEKF---------------P 189

Query: 239 AGVNLQWAARQPGNRIIARVFERGEGPTASSGTSASAVACAAWRAGWVESGEVAVVMPGG 298
              N+++      N +  RV+ERG G T + GT A AV  A+   G+V       ++ G 
Sbjct: 190 RKTNVEFVELIDKNTVKMRVWERGAGETLACGTGACAVLVASILKGYVGRKSTVKLLGGD 249

Query: 299 I 299
           +
Sbjct: 250 L 250