Pairwise Alignments

Query, 383 a.a., MFS transporter from Pseudomonas simiae WCS417

Subject, 382 a.a., Arabinose efflux permease from Pseudomonas stutzeri RCH2

 Score =  337 bits (865), Expect = 3e-97
 Identities = 170/356 (47%), Positives = 236/356 (66%)

Query: 19  STRIAFFIAGFGIAAWAPLVPYAKARADLSEGTLGLLLLCLGVGSIIAMPAAGALASRFG 78
           +TR  FF+AGFG++ WAPLVPY + R ++++   GLLLLC+GVGS+  MP +G L  R+G
Sbjct: 18  ATRCGFFMAGFGLSVWAPLVPYVRERIEMTDAVFGLLLLCIGVGSLTWMPLSGVLVGRWG 77

Query: 79  CRRVLSAGTIMICLALPTLATVSSIPLLMAGLFLFGAGLGTVDSTVNLQAVIVERASGKT 138
            R V     +++ LAL  +A   S+ LL   LF FG  LG +D  +N+QAV+VE A G+ 
Sbjct: 78  IRPVQLCSVVLLALALAGMALTESMWLLALALFCFGGSLGVIDVIMNIQAVLVETAVGRR 137

Query: 139 MMSGFHGLFSLGGIVGAAGVSGLLGLGLSPLQATLVVIVITLAALLKAAPHLLPYGSESS 198
           +MS FHG++SLG I GA   +GLL LGL+P   + ++I + + A L  A   LP  +   
Sbjct: 138 LMSNFHGMYSLGAISGALIFTGLLTLGLAPEIGSFLMIGLIVVANLGLARGFLPNRAPGG 197

Query: 199 GPAFAVPHGVVLFIGCLCFVVFLAEGAVLDWSAVFLSAERGLDEAYAGLGYAAFALTMTA 258
           G AF  P  +VL +G +CFVV+LAEGAVLDWSA++L+ ++GL+ A  GLGYAAFAL +T 
Sbjct: 198 GFAFVRPTAIVLLVGLMCFVVYLAEGAVLDWSALYLTGKKGLEVAKGGLGYAAFALMVTI 257

Query: 259 GRLTGDAIVRRLGATRVIVAGGALAAAGTFLATLSPAWEVALLGYALVGAGCSNIVPVLY 318
            R  G  +V  LG  RVI  GG +AA G  L+  +  W VAL+GY L G GC+N+ PVL 
Sbjct: 258 ARFAGGPLVNALGTARVIAFGGLVAAFGIVLSLAAEHWAVALIGYGLCGLGCANVSPVLI 317

Query: 319 TAVGKQNVMPEHIAVPAITTLGYAGILAGPAVIGFIAHGSSLATAFLLIGGLLAAV 374
           +++ +Q+ MP  +AV   TT+G+AG+LAGPA++G +AH SSL  AF L+  LL  +
Sbjct: 318 SSLSRQDGMPVQLAVTVATTIGFAGVLAGPAMMGVVAHFSSLGMAFALLAVLLVGI 373