Pairwise Alignments

Query, 295 a.a., transporter from Pseudomonas simiae WCS417

Subject, 296 a.a., DMT family transporter from Methanococcus maripaludis S2

 Score = 58.5 bits (140), Expect = 2e-13
 Identities = 70/263 (26%), Positives = 119/263 (45%), Gaps = 28/263 (10%)

Query: 40  GAQGTTAL--RLIFASVIMLFLLRPWRATL--TAKSLRTVIIYGMALGGMNFLF-YMSLR 94
           GA   T L  R + A +I+   L+  + +L  +  +   ++ YG  L  +N +F Y +  
Sbjct: 31  GANAVTTLMFRFLIAGLILYVFLKFKKISLKISRHNFVEILFYGAFLYALNTVFLYEAYN 90

Query: 95  SVPLGIAVALEFTGP-----LAVAIYASRRAVD-FLWIALAIIGLLLLIPLGEASSGIDL 148
            +P GIA  L F  P     L ++I+     ++  L +  + +G+  L  LG   +G D+
Sbjct: 91  YIPTGIATTLHFIYPVTVTLLMISIFKENLGINKVLALIFSFLGMYCL--LGGNCAGFDI 148

Query: 149 VGASYALGAGVCWALYILYGQKAGN---DNGVQTAALGVM------IAALFVAPIGIVHA 199
            G   A G+G+ +A YI+   K      D+ V    L ++      I  LF   + +  A
Sbjct: 149 YGVLLAAGSGLVYAGYIVSAGKCKYSKIDSYVTIFYLSILSSVLLFIYGLFTNTLTLNMA 208

Query: 200 GSALLTPALIPIAIGVAILSTALPYTLEMVALTRLPARTFGTLMSIEPAFGAFSGLLFLH 259
            S+  +  LI I   V     AL   LE + L   P+ T   L ++EP      G+L L+
Sbjct: 209 FSSYASIGLISIFCTVL----ALIAFLEGIKLIG-PSNT-AILSTLEPIVSIILGILLLN 262

Query: 260 EHLSFAQWLAIICIILASVGATV 282
           E LSF   L  + ++++ +  T+
Sbjct: 263 EVLSFKIGLGSVLVLISVIIVTI 285