Pairwise Alignments

Query, 302 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 299 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  224 bits (572), Expect = 1e-63
 Identities = 112/294 (38%), Positives = 182/294 (61%)

Query: 1   MDKLNAMAIFVRVIERGSFSAVAREMQTTQPTISKILRALETELGGKLIARSTRQLSLTD 60
           MD    + +FV V+E GSFS  AR +   +  +SK + ALE  LG KLI R+TR+L LTD
Sbjct: 1   MDIYANIPLFVSVVELGSFSEAARRLGINKSAVSKRISALEQALGVKLIQRTTRRLHLTD 60

Query: 61  EGQRYYSHCREILAAVDAAEHSFQTGKEAIAGPLRIGSSVSFGRLHIAARLSDFLQQYPD 120
            G++YY +  +  A +  A+ +  + + A+ G L++     FG+ HIA  LS+F +QYP 
Sbjct: 61  AGRQYYEYVHQAAALMQQAQDALASQQGAVQGSLKVSLPNVFGQRHIAPLLSEFSRQYPT 120

Query: 121 VQVDLQLNDHLQDMVSEGLDVTLRIGELRDSGLIARQIGTTHRVTLASPDYLARHPAPQT 180
           + +++ L+D + D++ EGLD+ +RIG+L DS L+A ++   H +  ASPDYLA    P++
Sbjct: 121 INLEVSLDDRVVDLLKEGLDMVVRIGDLPDSSLVAVKLAPCHSLLCASPDYLAHQSHPRS 180

Query: 181 PHELSQHNCLLFNLLSSQNQWVYEKEGTRQSVRITGNAQSNNSEAVREMVLTGLGIALSP 240
             +L  HNCL ++      +W +E+ G    ++  GN + NNSE +R ++L G+GIAL P
Sbjct: 181 LADLRGHNCLFYSYFRGGLEWSFERRGEVSRIKPRGNIKVNNSEVIRRLLLDGMGIALMP 240

Query: 241 LWLFYDDLKAGRVVALLQDYTAQSLPIHAVSAPNRRQSARVKAFVDYMADALAQ 294
            +L  ++L AG +V +L DY A +  I+A++   +   AR++ F+D++  ALA+
Sbjct: 241 RYLVEEELAAGTLVPVLSDYQAPTHGIYALTPERQHMPARLRVFIDFLKQALAE 294