Pairwise Alignments

Query, 367 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 479 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  247 bits (630), Expect = 5e-70
 Identities = 124/246 (50%), Positives = 174/246 (70%)

Query: 22  VFEDPKSQALLDHIQQVAPSEASVLIIGETGTGKELVARHIHNLSARRNRPFVAVNCGAF 81
           V  D KS  LL    +VA ++A+V+I+G +G+GKE+++R+IHN S R+  PF+A+NC A 
Sbjct: 132 VVADTKSLKLLALADKVAKTDANVMILGPSGSGKEVMSRYIHNASPRKEGPFIAINCAAI 191

Query: 82  SESLVEAELFGHEKGAFTGALSAKAGWFEEADGGTLFLDEIGDLPMAIQVKLLRVLQERE 141
            ++++EA LFG+EKGAFTGA+ A  G FE+A GGT+ LDEI ++ + +Q KLLRVLQERE
Sbjct: 192 PDNMLEATLFGYEKGAFTGAVQACPGKFEQAQGGTILLDEISEMDLNLQAKLLRVLQERE 251

Query: 142 VVRLGSRKSIPIDVRVLAATNVQLEKAINAGHFREDLYYRLDVVSLELSPLRDRPGDILP 201
           V RLGSRKSI +DVRVLA +N  L++ + AGHFREDLYYRL+V  L    L +R  DI P
Sbjct: 252 VERLGSRKSIKLDVRVLATSNRDLKQYVQAGHFREDLYYRLNVFPLTWPALCERKDDIEP 311

Query: 202 LTRHFIEAYSQRLGYGPITISREAEHKLKSYSWPGNIRELENVIHHTLLICRDGVIERDD 261
           L  H IE + ++LG    +I+  A  KL +Y WPGN+REL+NV+   L++  +G I+ + 
Sbjct: 312 LANHLIERHCKKLGLPVPSIAPNAITKLLNYPWPGNVRELDNVVQRALILSENGHIQSEH 371

Query: 262 LRLSNM 267
           + L  +
Sbjct: 372 ILLEGV 377