Pairwise Alignments

Query, 311 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 289 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  177 bits (448), Expect = 3e-49
 Identities = 91/287 (31%), Positives = 164/287 (57%), Gaps = 6/287 (2%)

Query: 19  EDLRVFLTVIRKAGFAAAADELGLSPAYVSKRIQILETTLATRLLHRTSRRIALTEDGER 78
           E +  F+ V     F  AA +LG+S A VS+++  LET +AT+L HRT+R+++++E G  
Sbjct: 5   EGVSEFVAVAEAESFTKAAKQLGISTAQVSRQVSALETRMATKLFHRTTRKVSVSEVGRI 64

Query: 79  VQRWAVRILEDFQQLSDELSDAHDSPRGRLHLCSSFGFGRNHVAPALSLMAEQYPDLEIR 138
             +   ++L+  ++    +++   +PRG L + +   +G   + P ++    +YP+LE++
Sbjct: 65  YYQHCRQVLDGLEEAERAITNLQSTPRGLLKITAPVTYGEKTLVPLVNDFIAKYPELEVK 124

Query: 139 LDLFDRVVDIVSEGFDLEIRVGDDIPGQHIGRRLVSNRRVLCAAPAYLQRHGTPQHLSDL 198
           ++L ++ VD++ +G+DL IR+G       + +RL S  + +CA+P Y+   G P  LS+L
Sbjct: 125 INLTNQKVDLIDDGYDLAIRLGQLKDSSIMAKRLGSRTQYVCASPDYVSTFGIPHSLSEL 184

Query: 199 EQHDCLVLKERDNAFGIWNLERDGAQESVRVRGPLSSNNGEIVLQWALDGRGVLLRSMWD 258
           EQH+CL+          W  + +G   +VRV+G L+ N+G  ++  A+ G G++    + 
Sbjct: 185 EQHNCLL-----GTLDYWRFQENGKTRNVRVKGNLTCNSGYALVDAAIKGIGIIQLPEYY 239

Query: 259 VKPLLEQGKLVQVLHGYTQ-SANVWAVYPTRLAYSGKLRACVEFLQE 304
           V P LE G+LV +L    Q    +WA+YP     S K+R  +++L E
Sbjct: 240 VLPFLEDGQLVPLLEQNRQPKEGIWALYPHNRHLSPKVRMLLDYLSE 286