Pairwise Alignments

Query, 336 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 341 a.a., ABC transporter from Sinorhizobium meliloti 1021

 Score =  379 bits (974), Expect = e-110
 Identities = 199/333 (59%), Positives = 243/333 (72%), Gaps = 6/333 (1%)

Query: 4   IRRYALAALASAVFAGSAVAKDYELLNVSYDPTRELYQDYNAEFTQFWKQSHPGDNVKIQ 63
           ++R  L  +    + G A A D  +LNVSYD TR+LY+++NA F + W Q+  G+ V IQ
Sbjct: 10  VKRALLVGMLQLGYIGLAQA-DTTILNVSYDSTRKLYKEFNAAFAEKW-QADTGETVTIQ 67

Query: 64  QSHGGSGKQGRAVIDGLRADVVTLALAGDIDEIARLGKTLPENWQTRLPDASTPYTSTIV 123
            SHGGSGKQ R VIDGL ADVVTLAL  DI  IA+    +P +W+TRL + S PYTST+V
Sbjct: 68  TSHGGSGKQARLVIDGLNADVVTLALEADIVAIAQATGKIPVDWKTRLENDSAPYTSTVV 127

Query: 124 FLVRKGNPKGIKDWGDLIKKDVSVITPNPKTSGGARWNFLAAWAYGLKT-GGSEAKAQEY 182
           FLVRKGNPKGI+DW DL K+ + VITPNPKTSGGARWNFLAAWA+   T  G +AKA+EY
Sbjct: 128 FLVRKGNPKGIRDWSDLTKEGIQVITPNPKTSGGARWNFLAAWAWARATNNGDDAKAEEY 187

Query: 183 VKELFKHVPVLDTGARGSTITFVNNGQGDVLLAWENEAFLALKEDGGADKFDIVVPSLSI 242
           V +LFKHV  LDTGA G+  TFV  G GDVLLAWENEA+LAL E+ G D FDIV PS+SI
Sbjct: 188 VAQLFKHVLALDTGAWGAMTTFVQRGLGDVLLAWENEAYLAL-EELGPDNFDIVTPSISI 246

Query: 243 LAEPPVAVVDKNAEKKGNTEIATEYLKHLYSPAGQEIAAKNFYRPRDAKVA-AKYAQQFP 301
            AEPPVA+VD N ++KG  ++A  YL +LYS  GQ+I AK++YRP   + A  K   +F 
Sbjct: 247 RAEPPVALVDGNVDRKGTRKMAEAYLNYLYSDVGQKIVAKHYYRPFKPEAADQKDIDRFA 306

Query: 302 KLDLVTIDKDFGGWKTAQPKFFNDGGVFDQIYT 334
            L LVTID +FGGWK AQPKFF  GG+FD+IY+
Sbjct: 307 DLTLVTID-EFGGWKEAQPKFFGAGGIFDRIYS 338