Pairwise Alignments

Query, 358 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 343 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

 Score = 59.3 bits (142), Expect = 1e-13
 Identities = 64/264 (24%), Positives = 111/264 (42%), Gaps = 25/264 (9%)

Query: 57  EDLAKTYGLKHIDTDMSSAQEIAKFKAEKDNASADIGDVGAAFGPIAVKQE-VTQPYKPS 115
           ++  K  G+K     +SS + +++ KAE+ N SAD+   G     I+ +Q+ + + YK  
Sbjct: 51  DEFEKDTGIKMEYVSLSSGEALSRLKAEQSNPSADVWLGGGIDAFISAQQDGLLEAYKSP 110

Query: 116 TWAQVPDWAKDKDGHWALAYTGTIAFIVNKKLL--HGSEVPTSWADLQTGKYKVS-VGDV 172
               +     ++DG+W      TI  + N  LL   G   P +W DL T  YK   +   
Sbjct: 111 NAKDIDPLFVEEDGYWTGVSLVTIGILENTDLLSEKGLPEPQTWDDLITDDYKGELIASN 170

Query: 173 STAAQASNAVLAAAIANKGDEKNIAPGLQFFTKIAQQGRLGLSNPTIATMEKGEVEVGIV 232
            T +  +   +   +   G+++      +F+       + G     + T   GE   G+ 
Sbjct: 171 PTVSGTAYFTICGILQMYGEDEGWNYLDKFYQNTPFLTKRGSGPGNLVT--AGEYAYGVA 228

Query: 233 WD-------FNGLSYKAKMANPDDYVVLIPSDGSVKSGYTTIINKYAKHPNAAKLTREYI 285
            D        + L  K+   N    V+  PS  S+ SG        AKHP  AK+  ++ 
Sbjct: 229 PDPHTTVIADSELPVKSVFLNK---VIWWPSPVSIVSG--------AKHPENAKIFVDWC 277

Query: 286 FSDAGQLNLAKGNAR-PIRAETDL 308
            S  GQ  L + + R P+R + ++
Sbjct: 278 LSKEGQEVLMQASPRVPVRGDIEV 301