Pairwise Alignments

Query, 704 a.a., peptidase S41 from Pseudomonas simiae WCS417

Subject, 495 a.a., Carboxyl-terminal protease (EC 3.4.21.102) from Xanthomonas campestris pv. campestris strain 8004

 Score =  150 bits (380), Expect = 1e-40
 Identities = 124/412 (30%), Positives = 195/412 (47%), Gaps = 58/412 (14%)

Query: 213 ARLDQTRAEDIFQAYINTFAMSYDPHTNYLSPDNAENFDINMSLSLEGIGA-VLQSDNDQ 271
           A +D    + +  A +       DPH+ Y   ++AE FD   + + +GIG  +LQ  ++ 
Sbjct: 64  AYVDPVEDKKLMHAAVRGLLSDLDPHSTYFDKEDAEAFDEQATGAYDGIGVELLQQQDNT 123

Query: 272 VKIVRLVPAGPADKTKQVAPADKIIGVAQGDKEMVDVVGWRLDEVVKLIRGPKGSVVRLE 331
           +K++  +   PA +   V   D I+ +   D + +D       + ++ +RG  GS V L 
Sbjct: 124 LKVIAPIDDTPAARAG-VKAGDVIVAI---DGKPIDA-----SKAMEPLRGESGSKVTLT 174

Query: 332 VIPHTNAPNDQTSKIVSITREAVKLEDQAVQKKVLNLKQDGKDYKLGVIEIPAFYLDFKA 391
           ++       D+ +K   IT +   +   +V+ K+L       +   G I I  F  D   
Sbjct: 175 IV------RDKVAKPFDITLQRETIRVASVRSKLL-------EPGYGYIRISTFQAD--- 218

Query: 392 FRAGDPDYKSTTRDVKKILTELQKE-KVDGVVIDLRNNGGGSLQEATELTSLFIDKGPTV 450
                     T  D +K L +LQ   K+ G+V+DLR+N GG L  A ++    +DKG  V
Sbjct: 219 ----------TGADFQKNLKQLQAGGKLRGLVLDLRSNPGGLLTSAVQVADDLLDKGNIV 268

Query: 451 LVRNADGRVDVLEDENPGAFYKG-PMALLVNRLSASASEIFAGAMQDYHRAMIIGGQTFG 509
             R      D   D  PG    G P+ +LV+  SASASE+ AGA++D  RA IIG +TFG
Sbjct: 269 STRGRISISDAKFDATPGDLLGGAPVVVLVDAGSASASEVLAGALRDNQRARIIGSRTFG 328

Query: 510 KGTVQTIQPLNHGE-LKLTLAKFYRVSGQSTQHQGVLP-----------DIDFPSIIDTK 557
           KG+VQT+ PL++G+ +KLT A++Y  SG+S Q  G++P           D D P+ +   
Sbjct: 329 KGSVQTVLPLDNGDSVKLTTARYYTPSGKSIQASGIVPEVMLTPEPQPGDADVPASL--T 386

Query: 558 EIGESALPEAMPWDT------IRPAIKPASDPFKPFLAQLKADHDTRSAKDA 603
           +  E+ LP  +  D           + P   P    LA+LK       A+ A
Sbjct: 387 DFSEATLPGHLRGDAEGEEGYSAGDVLPGDGPINEALAELKQPGSVAKAQAA 438



 Score = 25.4 bits (54), Expect = 0.007
 Identities = 25/98 (25%), Positives = 39/98 (39%), Gaps = 11/98 (11%)

Query: 20  ALALFIGLGFASMSTNTFAANSWDNLQPDRDEVIASLNVVELLKR---------HHYSKP 70
           +LALF   G+A  ++   A  + D+  P+ +E   S   ++ ++R           Y  P
Sbjct: 11  SLALFASPGWAQQASPAAAPATADD--PEANEAAVSKVPLDEIRRFVAVYNAVKQAYVDP 68

Query: 71  PLDDARSVIIYDSYLKLLDPSRSYFLASDIAEFDKWKT 108
             D           L  LDP  +YF   D   FD+  T
Sbjct: 69  VEDKKLMHAAVRGLLSDLDPHSTYFDKEDAEAFDEQAT 106