Pairwise Alignments

Query, 704 a.a., peptidase S41 from Pseudomonas simiae WCS417

Subject, 665 a.a., tail-specific protease from Vibrio cholerae E7946 ATCC 55056

 Score =  514 bits (1323), Expect = e-150
 Identities = 289/660 (43%), Positives = 406/660 (61%), Gaps = 41/660 (6%)

Query: 45  LQPDRDEVIASLNVVELLKRHHYSKPPLDDARSVIIYDSYLKLLDPSRSYFLASDIAEFD 104
           L P+     A+  V     R HY +  LDD  S  +++ YL++LD SR+ F  +DI  F 
Sbjct: 36  LVPEAQHATAAKRVTSRFTRSHYKQFNLDDQFSQAMFERYLEMLDYSRNIFTQADIDSFK 95

Query: 105 KWKTQFDDFLKSGDLQPAFTIYKRYLDRVKARLDFALGQLDKGVDKLDFTQKETLLVDRK 164
            W  Q DD LK+GD Q A+ +Y   +++   R  +AL  LD+   ++ F   E++ +DR 
Sbjct: 96  AWSLQLDDQLKAGDNQIAYDLYNLSMEKRFERFQYALSLLDQ---EMTFDADESIELDRT 152

Query: 165 DAPWLTSTAALDDLWRKRVKDEVLRLKIAGKEPKAIQELLTKRYKNQLARLDQTRAEDIF 224
            +PW      +++LWR+RVK + L LK+AGKE   I+E L KRY N + RL QT++ED+F
Sbjct: 153 KSPWPKDLKEINELWRQRVKYDALSLKLAGKEWPEIKETLDKRYNNAIKRLTQTKSEDVF 212

Query: 225 QAYINTFAMSYDPHTNYLSPDNAENFDINMSLSLEGIGAVLQSDNDQVKIVRLVPAGPAD 284
           Q Y+N FA   DPHT+YLSP NAE F   M+LSLEGIGAVLQ  +D   I  LV  GPA 
Sbjct: 213 QTYMNAFAREVDPHTSYLSPRNAEQFQSEMNLSLEGIGAVLQMTDDYTIIRSLVAGGPAA 272

Query: 285 KTKQVAPADKIIGVAQGDKEMVDVVGWRLDEVVKLIRGPKGSVVRLEVIPHTNAPNDQTS 344
            +KQ+   D+IIGV Q  +++VDVVGWRLD+VV+LI+GPKGS V+L V+P      D  S
Sbjct: 273 LSKQLGEGDRIIGVGQEGEDVVDVVGWRLDDVVQLIKGPKGSKVKLLVLPE---GKDAKS 329

Query: 345 KIVSITREAVKLEDQAVQKKVLNLKQDGKDYKLGVIEIPAFYLDFKAFRAGDPDYKSTTR 404
            +V+I R+ ++LED+AV+ +V  +++ GK  K+GV+E+P+FY+                +
Sbjct: 330 HVVTIVRDKIRLEDRAVKSEV--IEKAGK--KIGVLEVPSFYV-------------GLAQ 372

Query: 405 DVKKILTELQKEKVDGVVIDLRNNGGGSLQEATELTSLFIDKGPTVLVRNADGRVDVLED 464
           D +K+L EL+ +KVDG+++DLRNNGGG+L EAT L+ LFI  GP V VR++ GRV+V  D
Sbjct: 373 DTEKLLAELKAKKVDGIIVDLRNNGGGALTEATALSGLFITSGPVVQVRDSYGRVNVNSD 432

Query: 465 ENPGAFYKGPMALLVNRLSASASEIFAGAMQDYHRAMIIGGQTFGKGTVQTIQPLNH--- 521
            +    Y GPM +L+NR SASASEIFA AMQDY RA+I+G  +FGKGTVQ  + LNH   
Sbjct: 433 TDGSISYSGPMTVLINRYSASASEIFAAAMQDYGRAIILGENSFGKGTVQQHRSLNHIYD 492

Query: 522 ------GELKLTLAKFYRVSGQSTQHQGVLPDIDFPSIIDTKEIGESALPEAMPWDTIRP 575
                 G ++ T+ KFYR+ G STQ++GV+PDI +P+ I   E GES    A+PWD+I  
Sbjct: 493 LFDKELGYVQYTIQKFYRIDGGSTQNKGVVPDIAYPTAIAPSETGESVEDNALPWDSIDK 552

Query: 576 AIKPASDPFKPFLAQLKADHDTRSAKDAEFVFIRDKLALAKKLMEEKTVSLNEVDRRAQH 635
           A     + F   +A L+A H  R A D EF FI   +A  +   ++  +SLNE  R+ + 
Sbjct: 553 AKYERLNNFNTIIASLEAKHQQRVANDLEFGFIEQDIAKYRAEKDDNLLSLNEKVRKEES 612

Query: 636 ADIENKQLALENIRRKAKGEDPLKELKKEDEDALPTEAEKTKPEDDAYLAETGRILLDYL 695
           A  + ++LA  N R+KA G+     L+         +  K     DAYL E+  I+LD +
Sbjct: 613 AKADEERLARINQRQKALGKSTYASLQ---------DIPKDYEAPDAYLDESVNIMLDMI 663