Pairwise Alignments

Query, 704 a.a., peptidase S41 from Pseudomonas simiae WCS417

Subject, 681 a.a., carboxy-terminal protease (RefSeq) from Shewanella loihica PV-4

 Score =  496 bits (1278), Expect = e-144
 Identities = 298/692 (43%), Positives = 415/692 (59%), Gaps = 40/692 (5%)

Query: 25  IGLGFASMS-TNTFAANSWDNLQPDRDEVIASLNVVELLKRHHYSKPPLDDARSVIIYDS 83
           I +GF++ + T +  ++   +L  +    +AS  V  L  R HY +  LDDA S  ++D 
Sbjct: 13  IFVGFSAWALTPSIPSSELPSLTQEPQHKVASKRVTGLFTRAHYHRFDLDDAFSEQVFDR 72

Query: 84  YLKLLDPSRSYFLASDIAEFDKWKTQFDDFLKSGDLQPAFTIYKRYLDRVKARLDFALGQ 143
           YLK LD  R+  L SDI  F  + TQFDD LKSGDL  A+ ++     R   R  +AL  
Sbjct: 73  YLKQLDYRRNVLLQSDIDSFKPYATQFDDMLKSGDLTAAYKMFDLVQQRRYDRFAYALSL 132

Query: 144 LDKGVDKLDFTQK-ETLLVDRKDAPWLTSTAALDDLWRKRVKDEVLRLKIAGKEPKAIQE 202
           LDK   ++DF    ++   DR DA W    A L++LWR+RVK + L LK+ GK    I +
Sbjct: 133 LDK---EMDFNVPGDSYQYDRDDAAWPKDEAELNELWRQRVKYDALNLKLTGKNWDEIVK 189

Query: 203 LLTKRYKNQLARLDQTRAEDIFQAYINTFAMSYDPHTNYLSPDNAENFDINMSLSLEGIG 262
           +L KRY N + RL QT++ED+FQ  +N F+ S +PHT+YLSP NAE F + M+LSLEGIG
Sbjct: 190 VLDKRYNNAIKRLSQTKSEDVFQGVMNAFSRSVEPHTSYLSPRNAERFQMEMNLSLEGIG 249

Query: 263 AVLQSDNDQVKIVRLVPAGPADKTKQVAPADKIIGVAQGDKEMVDVVGWRLDEVVKLIRG 322
           AVLQ D+D   I  LV  GPA  ++++AP D+I+GV Q  KE+VDV+GWRLD+VV+LI+G
Sbjct: 250 AVLQMDDDYTVIKSLVAGGPAANSEKLAPEDRIVGVGQEGKEIVDVIGWRLDDVVELIKG 309

Query: 323 PKGSVVRLEVIPHTNAPNDQTSKIVSITREAVKLEDQAVQKKVLNLKQ-DGKDYKLGVIE 381
           PKGS V L+++P     + +    V+I R+ ++LED+A   +V+  +  D    K+GVI+
Sbjct: 310 PKGSKVVLQILPKKGGSSAKPID-VTIVRDKIRLEDRAATSEVIEPETGDYAGRKVGVIK 368

Query: 382 IPAFYLDFKAFRAGDPDYKSTTRDVKKILTELQKEKVDGVVIDLRNNGGGSLQEATELTS 441
           IP FY++              ++DV K L +L+  KV+GVVIDLR NGGG+L EAT LT 
Sbjct: 369 IPGFYMNL-------------SQDVTKELVKLKDAKVEGVVIDLRGNGGGALTEATLLTG 415

Query: 442 LFIDKGPTVLVRNADGRVDVLEDENPGAFYKGPMALLVNRLSASASEIFAGAMQDYHRAM 501
           LFI++GP V +R+A+G+V    D +    Y GP+ ++V+R SASASEIFA A+QDY RA+
Sbjct: 416 LFIEQGPVVQIRDANGKVSQNRDNDGRVTYSGPLTVMVDRYSASASEIFAAALQDYDRAL 475

Query: 502 IIGGQTFGKGTVQTIQPLNH---------GELKLTLAKFYRVSGQSTQHQGVLPDIDFPS 552
           I+G  TFGKGTVQ  + L           G ++ T+AKFYR++G STQ +GV PDI FPS
Sbjct: 476 IVGESTFGKGTVQQHKSLGRIYDMYDKPIGHVQYTIAKFYRINGGSTQLKGVTPDIPFPS 535

Query: 553 IIDTKEIGESALPEAMPWDTIRPAIKPASDPFKP-FLAQLKADHDTRSAKDAEFVFIRDK 611
            ++  E GE+    A+PWD +  A         P  +  L + H  R  KD EF +I   
Sbjct: 536 ALEPGEYGEAEEANALPWDKVPVAQYGTLGDITPELVTNLDSRHQQRIKKDVEFGYIDQD 595

Query: 612 LALAKKLMEEKTVSLNEVDRRAQHADIENKQLALENIRRKAKGEDPLKELKKEDEDALPT 671
           +A  KK  +E +VSL E +R A+    + KQLA  N RR   G + LK L   +ED    
Sbjct: 596 IAEFKKSHKETSVSLVEKERVAEREANDEKQLARLNERRAVDGLEALKSLDDAEEDV--- 652

Query: 672 EAEKTKPEDDAYLAETGRILLDYLKITKQVAK 703
                    DA+L ET  I LD + + ++VAK
Sbjct: 653 ------KAPDAFLDETVYITLDLVDM-ERVAK 677