Pairwise Alignments

Query, 704 a.a., peptidase S41 from Pseudomonas simiae WCS417

Subject, 428 a.a., carboxyl-terminal protease (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  148 bits (373), Expect = 6e-40
 Identities = 116/335 (34%), Positives = 167/335 (49%), Gaps = 37/335 (11%)

Query: 221 EDIFQAYINTFAMSYDPHTNYLSPDNAENFDINMSLSLEGIGAVLQSDNDQVKIVRLVPA 280
           +D+    +       DPH+ +LSP+  +      S    GIG  + S+N Q+ +V  +  
Sbjct: 56  KDLMNGAVKGMLQGLDPHSTFLSPEEFKEMQETTSGEFFGIGIEISSENGQLTVVSPIED 115

Query: 281 GPADKTKQVAPADKIIGV-AQGDKEMVDVVGWRLDEVVKLIRGPKGSVVRLEVIPHTNAP 339
            PA K    A  D I+ V  Q  +EM         E V  IRGPKGS V L ++ H  A 
Sbjct: 116 TPAFKAGLKA-GDLILAVDGQPTQEM------STQEAVSRIRGPKGSEVELLIL-HREAK 167

Query: 340 NDQTSKIVSITREAVKLEDQAVQKKVLNLKQDGKDYKLGVIEIPAFYLDFKAFRAGDPDY 399
              T KIV   R+A+ L    V  K   L+Q               Y+  +  R  +   
Sbjct: 168 APSTVKIV---RDAIPL----VSVKSKQLEQG--------------YVWVRLTRFSE--- 203

Query: 400 KSTTRDVKKILTELQKE-KVDGVVIDLRNNGGGSLQEATELTSLFIDKGPTVLVRN-ADG 457
             TT D+ + L E  K   V GVV+DLRNN GG L +A  ++ +F+  G  V +R   D 
Sbjct: 204 -RTTSDLLEALREANKRGPVKGVVLDLRNNPGGLLDQAVSVSDVFLRDGGIVSIRGRGDD 262

Query: 458 RVDVLEDENPGAFYKGPMALLVNRLSASASEIFAGAMQDYHRAMIIGGQTFGKGTVQTIQ 517
                  +        PM +L+N  SASASEI AGA++D  RA+++G ++FGKG+VQ + 
Sbjct: 263 TGREYNAKAQSTDVTAPMVVLINAGSASASEIVAGALRDQKRALLVGERSFGKGSVQNVI 322

Query: 518 PLNHGE-LKLTLAKFYRVSGQSTQHQGVLPDIDFP 551
           PL+ G  LKLT+A +Y  +G+S Q +G+ PDI+ P
Sbjct: 323 PLSDGAGLKLTVALYYTPNGRSIQAEGIDPDIEIP 357