Pairwise Alignments

Query, 637 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

Subject, 816 a.a., response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella loihica PV-4

 Score =  391 bits (1004), Expect = e-113
 Identities = 217/550 (39%), Positives = 322/550 (58%), Gaps = 6/550 (1%)

Query: 84  RQAAAVFDCTREGVLVTDTKGLIVHVNRAFMEITGYSREDVMGRQPSLFKSGRHSSNFYQ 143
           R+   + +   + V+ TD++ +I  +N     +TG+   D +G           +   Y+
Sbjct: 263 RRLKIMLNAIGDAVIATDSEAMITFMNPIAERLTGWVCRDAIGLHIEQVMDLCDAKTKYR 322

Query: 144 Q-----MFQSLERTGEWSGEIWNRRKSGEIYPQWQTIRVIHDDQGQVSHYVAVFSDISAI 198
                 +    +R    +         G  +    +   I D +G+V+  + VF D S  
Sbjct: 323 SPNPVTIAIKEKRNVAMALNCQLNSLDGTTFQIEDSAAPITDSEGKVTGGIIVFHDCSES 382

Query: 199 KDSEHELAHLAHHDPLTDLPNRLLFTDRAEQALASAQTHKRGCALLLLDLDHFKIINDSL 258
                +++HLA+HD LTDLPNR+L  DR   A A A ++ +  AL+L+D+DHFK +NDSL
Sbjct: 383 VAMSLKMSHLANHDQLTDLPNRILLHDRINHACAVADSYDKSVALMLIDIDHFKYLNDSL 442

Query: 259 GHNVGDQLLKLVGERLKALFGPGVTLARLGGDEFAVLAESCPQVAQAAGLAQRMLDAMKQ 318
           GH+ GDQ++K V +RL++L  P  TL R+GGDEF +L  S    +Q   +A  ++ ++  
Sbjct: 443 GHSYGDQVIKQVAKRLQSLIDPNATLGRIGGDEFVLLLPSLTATSQVDSIATDIVRSLNT 502

Query: 319 PFIFDGHQLFISASIGISLFPSDALSAEQLLRNADSALFKAKSAGREGYALYTEELTAHA 378
           PF  DG +  +S S+GIS++PSDAL AE+L+ + D+A+++AK  GR  +  ++E+L    
Sbjct: 503 PFRIDGQEYTLSVSVGISIYPSDALRAEELMTHVDAAMYRAKDLGRNRFCYFSEDLEQEL 562

Query: 379 QNRVEIASELRRALEQQELCVYYQPVHDLNDSRLIGVEALVRWQHPERGLVPPGEFIPIA 438
             R E+ + LR A++ + + VYYQP  DL    +IG EAL R   P   L+ P +FIP+A
Sbjct: 563 TKRHELVTLLRTAIDTEAIEVYYQPKVDLKTKEIIGAEALARLYDPSGKLISPLDFIPLA 622

Query: 439 ERTGLIADIDAWVMNQACRQMCDWLAQGTPLSFIAINVSSRLFARRELYEQVAQVLHDTG 498
           E TGLI  +   ++ Q+C     W  +G PL  IA+N++++ F   E  + VA+VL  TG
Sbjct: 623 EETGLIHQLGEIILKQSCMAAKAWQKRGRPLQ-IAVNIAAKQFTNPEFCDSVAKVLELTG 681

Query: 499 LDPAFLELEVTESAVMEDPEVALEQLHRLRELGLRLAIDDFGTGYSSLLRLKRLPVQKLK 558
           LD +FLELEVTES++M D + AL  L+ L  LGL +AIDDFGTGYSSL  LK  PV  LK
Sbjct: 682 LDSSFLELEVTESSLMYDFDEALNVLNTLSSLGLSIAIDDFGTGYSSLSYLKFFPVNTLK 741

Query: 559 IDQGFVAGLPWDEDDAAIVRVVIALAKSMGMQVHAEGIEQREQARFLLDQQCDLGQGYWF 618
           IDQ FV  +  DE    IV+ VI LAKS+ +++ AEGIE  EQ + L+  +C+ GQGY F
Sbjct: 742 IDQSFVKDMLGDEQSLDIVKAVIHLAKSLKLKLIAEGIEDAEQLQKLVALECEQGQGYMF 801

Query: 619 GRPVPAGEID 628
            +P+P  E D
Sbjct: 802 SKPLPLKEFD 811