Pairwise Alignments

Query, 637 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

Subject, 972 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  506 bits (1304), Expect = e-147
 Identities = 268/563 (47%), Positives = 356/563 (63%), Gaps = 6/563 (1%)

Query: 76  LKENRERLRQAAAVFDCTREGVLVTDTKGLIVHVNRAFMEITGYSREDVMGRQPS-LFKS 134
           +K+   RL  AA VFD   E ++VTD +G I  VN AF E+TGYS  D  GR P  +  S
Sbjct: 404 IKQAEARLHLAARVFDSLGEAMVVTDARGRIQSVNPAFSEVTGYSEADARGRAPGHILAS 463

Query: 135 GRHSSNFYQQMFQSLERTGEWSGEIWNRRKSGEIYPQWQTIRVIHDDQGQVSHYVAVFSD 194
           G+H   FY QM+QSL+  G+W GE+ NRRKSGE YP+W +I  I D  GQVS YV +F+D
Sbjct: 464 GQHDPAFYAQMWQSLQEQGKWQGEVINRRKSGETYPEWLSITAIKDGAGQVSQYVGLFTD 523

Query: 195 ISAIKDSEHELAHLAHHDPLTDLPNRLLFTDRAEQALASAQTHKRGCALLLLDLDHFKII 254
           I+  K +E  + HLA+HDPLT LPNR LF DR E AL  A   +R  A+LLLDLD FK +
Sbjct: 524 ITDRKQAEAHIHHLAYHDPLTGLPNRRLFYDRLENALRQAHRSRRKLAVLLLDLDRFKAV 583

Query: 255 NDSLGHNVGDQLLKLVGERLKALFGPGVTLARLGGDEFAVLAESCPQVAQAAGLAQRMLD 314
           ND+LGH+ GD LLK VG RL      G TLARLGGDEF +L         A+ +A ++L 
Sbjct: 584 NDTLGHDQGDLLLKEVGARLSLCLREGDTLARLGGDEFVLLLPEVLSAEDASIVAGKLLA 643

Query: 315 AMKQPFIFDGHQLFISASIGISLFPSDALSAEQLLRNADSALFKAKSAGREGYALYTEEL 374
              QP      ++F S SIGI+L+P+D    E LL++AD A++ AK  GR  Y  +    
Sbjct: 644 QFDQPVRLGEREIFASTSIGIALYPADGEDGESLLKHADVAMYAAKDGGRAAYRFFIASH 703

Query: 375 TAHAQNRVEIASELRRALEQQELCVYYQPVHDLNDSRLIGVEALVRWQHPERGLVPPGEF 434
              +  R+E+ ++LRRA+E ++L +YYQP    +  R+ GVEALVRW+HP RGLV P  F
Sbjct: 704 NERSLERLELENDLRRAVEGEQLLLYYQPQIGASSGRIAGVEALVRWRHPTRGLVMPDSF 763

Query: 435 IPIAERTGLIADIDAWVMNQACRQMCDWLAQGTPLSFIAINVSSRLFARRELYEQVAQVL 494
           I +AE  GLI  I  W +  ACRQ+  W  QG P+  +A+NVS+R   R +  ++V QV+
Sbjct: 764 IALAENAGLIDAIGHWCLVAACRQLRAWQEQGVPVPRVAVNVSARQLRRWDFAQEVLQVV 823

Query: 495 HDTGLDPAFLELEVTESAVMEDPEVALEQLHRLRELGLRLAIDDFGTGYSSLLRLKRLPV 554
             +G+DPA LELE+TES++ +DPE  L     LR+ G+R++IDDFGTGYSSL  L R PV
Sbjct: 824 TQSGIDPAGLELELTESSLADDPEQILAIFSTLRQAGVRVSIDDFGTGYSSLSYLSRYPV 883

Query: 555 QKLKIDQGFVAGLPWDEDDAAIVRVVIALAKSMGMQVHAEGIEQREQARFLLDQQCDLGQ 614
            ++KID+ FV+ L  D +  ++VR VI LA  +GM+  AEG+E   Q + L D  CD  Q
Sbjct: 884 DEVKIDRSFVSRLLDDREARSVVRAVILLAHGLGMRTVAEGVETEAQWQVLSDLDCDELQ 943

Query: 615 GYWFGRPVPAGEI-----DWSKA 632
           GY F +PVP  +I     DW ++
Sbjct: 944 GYLFSKPVPPHQIPLLKGDWQRS 966



 Score = 33.9 bits (76), Expect = 4e-05
 Identities = 41/162 (25%), Positives = 64/162 (39%), Gaps = 11/162 (6%)

Query: 54  LSALAIYLICARFARANQLQQPLKENRERLRQAAAVFD----CTREGVLVTDTKGLIVHV 109
           L+  A++LI    A    +   LK++   L  + A  D       EG+L  D  G I   
Sbjct: 258 LALFALFLI----ATVVYIMVELKKSALELGHSHAFLDNIANTLAEGILALDRGGRITFA 313

Query: 110 NRAFMEITGYSREDVMGRQPSLFKSGRHSSNFYQQMFQSLERTGEWSGEIWNRRKSGEIY 169
           N+    + G +   ++GR  +       +      + ++L     + GE    R  G  +
Sbjct: 314 NQRAEALLGAAPGGLLGRDAATVLWPGAAPAEVSGLARALATGAVFEGEDDFVRSDGSAF 373

Query: 170 PQWQTIRVIHDDQGQVSH--YVAVFSDISAIKDSEHELAHLA 209
           P       +   +G      YVA F DIS IK +E  L HLA
Sbjct: 374 PVAVLGAPLRGGEGDADQAGYVASFRDISEIKQAEARL-HLA 414