Pairwise Alignments

Query, 637 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

Subject, 1422 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  387 bits (995), Expect = e-111
 Identities = 216/550 (39%), Positives = 315/550 (57%), Gaps = 7/550 (1%)

Query: 77   KENRERLRQAAAVFDCTREGVLVTDTKGLIVHVNRAFMEITGYSREDVMGRQPSLFKSGR 136
            K+  E+LR      +   EG+ + D++   V VN A   I+  +R D +G   +L     
Sbjct: 861  KQKEEQLRLFEKAIENISEGMFILDSEYRFVEVNEACCRISQRNRSDFIG---NLLTFEL 917

Query: 137  HSSNFYQQMFQSLERTGEWSGEIWNRRKSGEIYPQWQTIRVIHDDQGQVSHYVAVFSDIS 196
            +  +F  Q+   L++ G W+ E+   R     +    TI  I+D+ G++SHYV VFSDIS
Sbjct: 918  YPESFSNQIRTMLKQQGRWASEVEANRGDNSHFHMELTIDAIYDELGELSHYVGVFSDIS 977

Query: 197  AIKDSEHELAHLAHHDPLTDLPNRLLFTDRAEQALASAQTHKRGCALLLLDLDHFKIIND 256
              K  E EL  L ++D LT LPNR       +  L +    +   AL++LDLD+FK IND
Sbjct: 978  RRKQQEEELRKLTNNDLLTGLPNR----SNLQVTLGNLVNKEINHALMVLDLDNFKRIND 1033

Query: 257  SLGHNVGDQLLKLVGERLKALFGPGVTLARLGGDEFAVLAESCPQVAQAAGLAQRMLDAM 316
            SLGH VGD+LLKLV  R+K+       + RLGGDEFA++ +    +  +A +A R++DA 
Sbjct: 1034 SLGHQVGDKLLKLVSVRIKSSVPKNTNIYRLGGDEFAIVLDKTSDILASAAIAGRIVDAF 1093

Query: 317  KQPFIFDGHQLFISASIGISLFPSDALSAEQLLRNADSALFKAKSAGREGYALYTEELTA 376
               +  D  QL +  S+GI L+P D  + + LLR AD A++ AKSAG   Y  Y+E L  
Sbjct: 1094 NTVYEIDNEQLVLGVSVGIVLYPDDEQNEQALLRKADIAMYHAKSAGGNCYQFYSESLNE 1153

Query: 377  HAQNRVEIASELRRALEQQELCVYYQPVHDLNDSRLIGVEALVRWQHPERGLVPPGEFIP 436
            HA  ++E  + +R  L++    VYYQP  DL    + G+EALVR  HP  GL+PP +FIP
Sbjct: 1154 HAIKQLETENLIREGLKEDLFEVYYQPKVDLKHGHVAGMEALVRLNHPTLGLIPPNDFIP 1213

Query: 437  IAERTGLIADIDAWVMNQACRQMCDWLAQGTPLSFIAINVSSRLFARRELYEQVAQVLHD 496
            +AE  GLI +I   V+ +AC     W  QG     +A+N+SSR FA  +L +++  +L  
Sbjct: 1214 LAEENGLIVEIGEIVLRKACFAAQKWREQGLFKGRVAVNLSSRQFALPDLQQRIESILRL 1273

Query: 497  TGLDPAFLELEVTESAVMEDPEVALEQLHRLRELGLRLAIDDFGTGYSSLLRLKRLPVQK 556
            T L  + LELE+TE  V++ PE+A+  + +L ++G+ LA+DDFGTGYSSL  LKR P+  
Sbjct: 1274 TQLPASHLELEITEGTVIKQPEMAITVMQQLAKMGVSLALDDFGTGYSSLSYLKRFPIHT 1333

Query: 557  LKIDQGFVAGLPWDEDDAAIVRVVIALAKSMGMQVHAEGIEQREQARFLLDQQCDLGQGY 616
            LKID+ FV  +   + D  +V  +I +A +MG+ V  EG+EQ  Q   L    C+  QGY
Sbjct: 1334 LKIDKAFVDDIDKSDRDLKMVDSIITIAHNMGLSVVGEGVEQAAQLNILRALNCEEIQGY 1393

Query: 617  WFGRPVPAGE 626
             F + +   E
Sbjct: 1394 IFSKAINEAE 1403