Pairwise Alignments

Query, 311 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 306 a.a., transcriptional regulator GcvA from Vibrio cholerae E7946 ATCC 55056

 Score =  144 bits (363), Expect = 3e-39
 Identities = 97/300 (32%), Positives = 149/300 (49%), Gaps = 12/300 (4%)

Query: 1   MSRRNVDLPPLNCLQTFEAAARHLSFTQAAHELNLTQSAVSRQVKRLEEDLARPLFYRLA 60
           MSRR   LPPLN L+ FEAAARHLSFT+AA EL +TQ+AVS Q+K LEE L   LF R  
Sbjct: 1   MSRR---LPPLNSLKVFEAAARHLSFTRAAEELFVTQAAVSHQIKALEEFLGLKLFRRRN 57

Query: 61  QGLSLTPAGVRYFRTVQRLLRELDRESAELRRRGADRQLTLASTPTISSIWLAGLLPQFQ 120
           + L LT  G  YF  ++ +   L   + +L  R     LT++  P+ +  WL   L  F 
Sbjct: 58  RSLLLTEEGQSYFLDIKDIFSSLAEATDKLLERSEKGALTISLPPSFAIQWLVPRLADFN 117

Query: 121 RDHPDLDIRILCSESPSHLDVSEYDLGLFYHLDELAAPHGLELSPVFDSEQVITVCSPGY 180
           +  PD+D+RI   +        + D+ ++Y         GL    ++  E +I +CSP  
Sbjct: 118 QQEPDIDVRIKAVDMDEGSLTDDVDVAIYYGRGSWP---GLRADKLY-QEFLIPLCSPAL 173

Query: 181 LERHGPIRDLHHLLHAHTLLIVEDHHHDWLTWADWFADAGADYYSPRHALRTNSYQLLMQ 240
           L  + P+  L  L + HTLL    H      W  +  + G D  +  H    +   +++Q
Sbjct: 174 LLGNKPMEKLSDLAY-HTLL----HDTSRKDWKQFAKENGLDNVNVNHGPIFSHSTMVLQ 228

Query: 241 SAVMGHGVALGWKRLLETDLESGRLQMALPHSMHSRGRLHLMQPHHRNPPAAVRSFRQWL 300
           +A  G GVALG   L + ++++GRL       + +    +++    +     + +FR W+
Sbjct: 229 AAAHGQGVALGNNVLAQPEIDAGRLIAPFDEVLMTNNAFYVVCHEKQADMGRIATFRDWM 288