Pairwise Alignments

Query, 259 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 262 a.a., NodJ ABC transporter permease from Sinorhizobium meliloti 1021

 Score = 54.7 bits (130), Expect = 2e-12
 Identities = 35/184 (19%), Positives = 84/184 (45%), Gaps = 11/184 (5%)

Query: 39  VLYFVIFGNLIGRQIGDMGGFTYMEYIVPGLIMMSVITNS-YGNVVSSFFGSKFQRSIEE 97
           ++Y    G  +G  +G + G +Y+ ++  G++  S +T S +  + ++F   + QR+ E 
Sbjct: 43  LIYLFGLGAGLGMMVGRVDGVSYIAFLSAGMVATSAMTASTFETIYATFARMRAQRTWEA 102

Query: 98  LMVSPVSPHTILIGYTLGGVLRGLMVGVIVTLLSLFFTHLQVHHLGVTILVVVLTATIFS 157
           ++ + V+   I++G       +  + G  + +++    + +   L   + V+ LT   F+
Sbjct: 103 ILHTQVTIGDIVLGELAWAATKASLAGTGIGVVAATLGYTEWVSLLYALPVIALTGLAFA 162

Query: 158 LLGFINAVFARNFDDISIIPTFVLTPLTYLG----------GVFYSISLLPPFWQTVSLA 207
            L  I    A +++      T V+TP+ +L           G F  ++ + P   ++ + 
Sbjct: 163 SLAMIVTALAPSYEYFIFYQTLVITPMLFLSGAVFPVNQLPGAFQHVTRILPLAHSIDVI 222

Query: 208 NPVL 211
            P++
Sbjct: 223 RPIM 226